RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	RBM10	P98175	930 aa	Known RBP	5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	AMPD2	Q01433	879 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	GRB10	Q13322	594 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	PPP2R5D	Q14738	602 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	GAB4	Q2WGN9	574 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	ARHGEF39	Q8N4T4	335 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	LINC00116	Q8NCU8	138 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	SNTG2	Q9NY99	539 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	TCFL5	Q9UL49	500 aa		5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	SMG5	Q9UPR3	1016 aa	Known RBP	5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.04	□□□□□ -1.6
LMO7-223	ENST00000533299	ZP2	Q05996	745 aa		5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	EGR3	Q06889	387 aa		5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	BMS1	Q14692	1282 aa	Known RBP	5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	MRM1	Q6IN84	353 aa	Known RBP	5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	ZDHHC15	Q96MV8	337 aa		5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	SUSD2	Q9UGT4	822 aa		5.03	□□□□□ -1.6
LMO7-223	ENST00000533299	SYP	P08247	313 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	LINC00310	P59036	64 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	RASA3	Q14644	834 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	SLC10A6	Q3KNW5	377 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	TMEM67	Q5HYA8	995 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	NOP9	Q86U38	636 aa	Known RBP	5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	USHBP1	Q8N6Y0	703 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	CCDC140	Q96MF4	163 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	IPO9	Q96P70	1041 aa	Known RBP	5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	KCNC2	Q96PR1	638 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	CARS2	Q9HA77	564 aa	Known RBP	5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	EMC9	Q9Y3B6	208 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	PCDHA11	Q9Y5I1	949 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299		H0Y8X5	98 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	CELA3B	P08861	270 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	DUSP4	Q13115	394 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	FOXP3	Q9BZS1	431 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	APEX2	Q9UBZ4	518 aa		5.02	□□□□□ -1.61
LMO7-223	ENST00000533299	KCNH1	O95259	989 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	ESR1	P03372	595 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	CD3E	P07766	207 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	VAV1	P15498	845 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	BMP7	P18075	431 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	RPL10	P27635	214 aa	Known RBP	5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	SSRP1	Q08945	709 aa	Known RBP	5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	CRTC3	Q6UUV7	619 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	TRIM59	Q8IWR1	403 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	ZMYM5	Q9UJ78	669 aa		5.01	□□□□□ -1.61
LMO7-223	ENST00000533299	IGSF3	O75054	1194 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	ZNF205	O95201	554 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	ITGAV	P06756	1048 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	HOXC12	P31275	282 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	CD96	P40200	585 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	CTSK	P43235	329 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	FYB2	Q5VWT5	728 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	WAPL	Q7Z5K2	1190 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	ZNF227	Q86WZ6	799 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	NAT16	Q8N8M0	369 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	KIRREL1	Q96J84	757 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	ALPK1	Q96QP1	1244 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	DNAJC7	Q99615	494 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	SPATA9	Q9BWV2	254 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	CDADC1	Q9BWV3	514 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	NSUN3	Q9H649	340 aa	Known RBP	5	□□□□□ -1.61
LMO7-223	ENST00000533299	MINPP1	Q9UNW1	487 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	TRBV23OR9-2	A0A075B6M9	112 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	TRAV20	A0A0B4J274	112 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	WASH4P	A8MWX3	477 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	CP	P00450	1065 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	GSTM1	P09488	218 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	SEPHS1	P49903	392 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	LONRF2	Q1L5Z9	754 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	DPY19L1	Q2PZI1	675 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	EEF1DP3	Q658K8	133 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	SPPL2C	Q8IUH8	684 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	ZNF513	Q8N8E2	541 aa	Predicted RBP	5	□□□□□ -1.61
LMO7-223	ENST00000533299	MRGPRX3	Q96LB0	322 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	AARSD1	Q9BTE6	412 aa	Known RBP	5	□□□□□ -1.61
LMO7-223	ENST00000533299	CYP26B1	Q9NR63	512 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	PFDN2	Q9UHV9	154 aa		5	□□□□□ -1.61
LMO7-223	ENST00000533299	KDM2B	Q8NHM5	1336 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299		A0A1W2PQU0	124 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	FAM221B	A6H8Z2	402 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	FKTN	O75072	461 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	VAMP4	O75379	141 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	TBC1D8	O95759	1140 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	PPP2R2A	P63151	447 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	TEK	Q02763	1124 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	GTF2IRD2B	Q6EKJ0	949 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	CYP2R1	Q6VVX0	501 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	GTF2IRD2	Q86UP8	949 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	OXR1	Q8N573	874 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	FCRL2	Q96LA5	508 aa	Predicted RBP	4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	SLC26A8	Q96RN1	970 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	CDC6	Q99741	560 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	SLC12A9	Q9BXP2	914 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	NKX2-4	Q9H2Z4	354 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	SLAMF8	Q9P0V8	285 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	TMEM59L	Q9UK28	342 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms