RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SAFBQ15424 915 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMPD1-208ENST00000533123 NPY5RQ15761 445 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 LRSAM1Q6UWE0 723 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 LINC00301Q8NCQ3 95 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 CCDC148Q8NFR7 591 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 POLR3EQ9NVU0 708 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 RLFQ13129 1914 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 PARP14Q460N5 1801 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 SMCO2A6NFE2 343 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 hCG_1984214I3L0E3 225 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 HOXA7P31268 230 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-208ENST00000533123 NR5A1Q13285 461 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 GPAT2Q6NUI2 795 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 ZNF713Q8N859 430 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-208ENST00000533123 SLC38A10Q9HBR0 1119 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 CCL15-CCL14A0A0B4J2E2 113 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 VWA5AO00534 786 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 ME1P48163 572 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 MRE11P49959 708 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 CCL15Q16663 113 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 ANO1Q5XXA6 986 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 RASAL3Q86YV0 1011 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 CPXCR1Q8N123 301 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 CCDC12Q8WUD4 166 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-208ENST00000533123 PANK2Q9BZ23 570 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 HOXC10Q9NYD6 342 aa21.16■□□□□ 0.98
SMPD1-208ENST00000533123 CETPP11597 493 aa21.15■□□□□ 0.98
SMPD1-208ENST00000533123 NASPP49321 788 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-208ENST00000533123 STK38Q15208 465 aa21.15■□□□□ 0.98
SMPD1-208ENST00000533123 NOSTRINQ8IVI9 506 aa21.15■□□□□ 0.98
SMPD1-208ENST00000533123 ZMYND12Q9H0C1 365 aa21.15■□□□□ 0.98
SMPD1-208ENST00000533123 ZNF536O15090 1300 aa21.15■□□□□ 0.98
SMPD1-208ENST00000533123 SPDYE16A6NNV3 312 aaPredicted RBP21.14■□□□□ 0.98
SMPD1-208ENST00000533123 KRT2P35908 639 aa21.14■□□□□ 0.98
SMPD1-208ENST00000533123 BRI3BPQ8WY22 251 aa21.14■□□□□ 0.98
SMPD1-208ENST00000533123 AGBL1Q96MI9 1066 aa21.14■□□□□ 0.98
SMPD1-208ENST00000533123 RAVER2Q9HCJ3 691 aaKnown RBP21.14■□□□□ 0.98
SMPD1-208ENST00000533123 DACT1Q9NYF0 836 aa21.14■□□□□ 0.98
SMPD1-208ENST00000533123 ZBED4O75132 1171 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 NR1I2O75469 434 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 CALML3P27482 149 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 IRX3P78415 501 aaPredicted RBP21.14■□□□□ 0.97
SMPD1-208ENST00000533123 P2RX7Q99572 595 aaKnown RBP21.14■□□□□ 0.97
SMPD1-208ENST00000533123 ASCC2Q9H1I8 757 aaPredicted RBP21.14■□□□□ 0.97
SMPD1-208ENST00000533123 PCDHA7Q9UN72 937 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 PCDHA4Q9UN74 947 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 ADAMTS5Q9UNA0 930 aa21.14■□□□□ 0.97
SMPD1-208ENST00000533123 CTDP1Q9Y5B0 961 aaPredicted RBP21.14■□□□□ 0.97
SMPD1-208ENST00000533123 YEATS4O95619 227 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 RBSNQ9H1K0 784 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 FOXP1Q9H334 677 aaPredicted RBP21.13■□□□□ 0.97
SMPD1-208ENST00000533123 BRMS1Q9HCU9 246 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 C6orf50Q9HD87 102 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 ICAM1P05362 532 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 SF3A1Q15459 793 aaKnown RBP21.13■□□□□ 0.97
SMPD1-208ENST00000533123 BLIDQ8IZY5 108 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 RASGRP4Q8TDF6 673 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 GOLPH3LQ9H4A5 285 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 RRAGDQ9NQL2 400 aaPredicted RBP21.13■□□□□ 0.97
SMPD1-208ENST00000533123 CCPG1Q9ULG6 757 aa21.13■□□□□ 0.97
SMPD1-208ENST00000533123 SPTLC2O15270 562 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 GNA11P29992 359 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 CAMK4Q16566 473 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 POTEEQ6S8J3 1075 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 CCAR1Q8IX12 1150 aaKnown RBP21.12■□□□□ 0.97
SMPD1-208ENST00000533123 MYPNQ86TC9 1320 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 ESYT2A0FGR8 921 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 BTBD19C9JJ37 291 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 PEX10O60683 326 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 FDX1P10109 184 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 NOM1Q5C9Z4 860 aaKnown RBP21.12■□□□□ 0.97
SMPD1-208ENST00000533123 FAM177A1Q8N128 213 aaPredicted RBP21.12■□□□□ 0.97
SMPD1-208ENST00000533123 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 KCNG4Q8TDN1 519 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 PSTPIP2Q9H939 334 aa21.12■□□□□ 0.97
SMPD1-208ENST00000533123 COL11A1P12107 1806 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-208ENST00000533123 PCNTO95613 3336 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 SLC10A3P09131 477 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 TOB1P50616 345 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-208ENST00000533123 ADCY7P51828 1080 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 PABPC4Q13310 644 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMPD1-208ENST00000533123 TMEM132BQ14DG7 1078 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 EARS2Q5JPH6 523 aaKnown RBP21.11■□□□□ 0.97
SMPD1-208ENST00000533123 GALNT17Q6IS24 598 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 PTPN18Q99952 460 aa21.11■□□□□ 0.97
SMPD1-208ENST00000533123 FAM205CA6NFA0 338 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 PDHXO00330 501 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 DAGLBQ8NCG7 672 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 RIC8AQ9NPQ8 531 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 ZNF214Q9UL59 606 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-208ENST00000533123 M0R2N6 131 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 CYP2C8P10632 490 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 OSBPP22059 807 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 MARCKSP29966 332 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-208ENST00000533123 HERVK_113P62684 666 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 TRAF1Q13077 416 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 GRM1Q13255 1194 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 PTPAQ15257 358 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 PAXIP1Q6ZW49 1069 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms