RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 CCDC194A0A1B0GVG4 234 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L15C9J2P7 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L13C9JLJ4 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L11C9JVI0 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L18D6R9N7 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L22D6RA61 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L17D6RBQ6 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L19D6RCP7 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L20D6RJB6 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 EDIL3O43854 480 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 TRAPPC10P48553 1259 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L24Q0WX57 530 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 INF2Q27J81 1249 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 CST9Q5W186 159 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 USP17L6PQ6QN14 398 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 ATG4CQ96DT6 458 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 GBA2Q9HCG7 927 aaPredicted RBP23.22■■□□□ 1.31
GSDMD-212ENST00000533063 ADAMTS5Q9UNA0 930 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 UNCXA6NJT0 531 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 CXCL11O14625 94 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 CELF2O95319 508 aaKnown RBP23.21■■□□□ 1.31
GSDMD-212ENST00000533063 ICAM1P05362 532 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 MRPL12P52815 198 aaKnown RBP23.21■■□□□ 1.31
GSDMD-212ENST00000533063 MOGSQ13724 837 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 TTC38Q5R3I4 469 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 AXDND1Q5T1B0 1012 aaPredicted RBP23.21■■□□□ 1.31
GSDMD-212ENST00000533063 CHADLQ6NUI6 762 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 KRT25Q7Z3Z0 450 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 AGBL1Q96MI9 1066 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 MRVI1Q9Y6F6 885 aa23.21■■□□□ 1.31
GSDMD-212ENST00000533063 VWA5AO00534 786 aa23.2■■□□□ 1.3
GSDMD-212ENST00000533063 MARCKSP29966 332 aaPredicted RBP23.2■■□□□ 1.3
GSDMD-212ENST00000533063 FKBP1BP68106 108 aa23.2■■□□□ 1.3
GSDMD-212ENST00000533063 REPS2Q8NFH8 660 aa23.2■■□□□ 1.3
GSDMD-212ENST00000533063 NOL7Q9UMY1 257 aaKnown RBP23.2■■□□□ 1.3
GSDMD-212ENST00000533063 PPP6R2O75170 966 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 MBD3O95983 291 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 DSG3P32926 999 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 ME1P48163 572 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 A0A0G2JMZ2 1700 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 COG2Q14746 738 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 NONOQ15233 471 aaKnown RBP eCLIP23.19■■□□□ 1.3
GSDMD-212ENST00000533063 ZNF174Q15697 407 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 POTEEQ6S8J3 1075 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 TBCKQ8TEA7 893 aa23.19■■□□□ 1.3
GSDMD-212ENST00000533063 PROCA1Q8NCQ7 364 aaPredicted RBP23.18■■□□□ 1.3
GSDMD-212ENST00000533063 SLC10A4Q96EP9 437 aa23.18■■□□□ 1.3
GSDMD-212ENST00000533063 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
GSDMD-212ENST00000533063 RAVER2Q9HCJ3 691 aaKnown RBP23.18■■□□□ 1.3
GSDMD-212ENST00000533063 MORC2Q9Y6X9 1032 aaPredicted RBP23.18■■□□□ 1.3
GSDMD-212ENST00000533063 RBBP6Q7Z6E9 1792 aaKnown RBP23.17■■□□□ 1.3
GSDMD-212ENST00000533063 LIG1P18858 919 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 ADALQ6DHV7 355 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 CCPG1Q9ULG6 757 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 SPDYE16A6NNV3 312 aaPredicted RBP23.17■■□□□ 1.3
GSDMD-212ENST00000533063 PIK3CDO00329 1044 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 GRIN1Q05586 938 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 CPXCR1Q8N123 301 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 C4orf32Q8N8J7 132 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 TMEM63CQ9P1W3 806 aa23.17■■□□□ 1.3
GSDMD-212ENST00000533063 FBXO2Q9UK22 296 aaPredicted RBP23.17■■□□□ 1.3
GSDMD-212ENST00000533063 ABCB11O95342 1321 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 FDX1P10109 184 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 HOXA7P31268 230 aaPredicted RBP23.16■■□□□ 1.3
GSDMD-212ENST00000533063 MCM7P33993 719 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 TRAF1Q13077 416 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
GSDMD-212ENST00000533063 GADL1Q6ZQY3 521 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 CLIC6Q96NY7 704 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 GOLPH3LQ9H4A5 285 aa23.16■■□□□ 1.3
GSDMD-212ENST00000533063 MYPNQ86TC9 1320 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 PTPREP23469 700 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 HOXA13P31271 388 aaPredicted RBP23.15■■□□□ 1.3
GSDMD-212ENST00000533063 ATP2C1P98194 919 aaPredicted RBP23.15■■□□□ 1.3
GSDMD-212ENST00000533063 C2orf69Q8N8R5 385 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 ZNF214Q9UL59 606 aaPredicted RBP23.15■■□□□ 1.3
GSDMD-212ENST00000533063 MRPL11Q9Y3B7 192 aaKnown RBP23.15■■□□□ 1.3
GSDMD-212ENST00000533063 A0A1W2PQ27 194 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 A0A1W2PQ64 194 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 A0A1W2PQD8 194 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 GOLGA6L4A6NEF3 574 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 ZBED4O75132 1171 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 PTGDRQ13258 359 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 NEK8Q86SG6 692 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 CRYGNQ8WXF5 182 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 CEP131Q9UPN4 1083 aa23.15■■□□□ 1.3
GSDMD-212ENST00000533063 TMEM132BQ14DG7 1078 aa23.14■■□□□ 1.29
GSDMD-212ENST00000533063 GPAT2Q6NUI2 795 aa23.14■■□□□ 1.29
GSDMD-212ENST00000533063 GZF1Q9H116 711 aaPredicted RBP23.14■■□□□ 1.29
GSDMD-212ENST00000533063 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.29
GSDMD-212ENST00000533063 AGTPBP1Q9UPW5 1226 aa23.14■■□□□ 1.29
GSDMD-212ENST00000533063 RIPK3Q9Y572 518 aa23.14■■□□□ 1.29
GSDMD-212ENST00000533063 NFIBO00712 420 aa23.13■■□□□ 1.29
GSDMD-212ENST00000533063 KIF3CO14782 793 aa23.13■■□□□ 1.29
GSDMD-212ENST00000533063 AP3B2Q13367 1082 aa23.13■■□□□ 1.29
GSDMD-212ENST00000533063 LETM2Q2VYF4 491 aa23.13■■□□□ 1.29
GSDMD-212ENST00000533063 MUM1L1Q5H9M0 696 aa23.13■■□□□ 1.29
GSDMD-212ENST00000533063 SHC4Q6S5L8 630 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms