RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LCTP09848 1927 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 ICAM1P05362 532 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 ITGB8P26012 769 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 FAAP100Q0VG06 881 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 C9orf50Q5SZB4 431 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 SYDE2Q5VT97 1194 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 MFSD6Q6ZSS7 791 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 GLT1D1Q96MS3 346 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 TOX2Q96NM4 488 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 ASTN1O14525 1302 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 FRMPD2Q68DX3 1309 aaPredicted RBP19.82■□□□□ 0.76
CPSF1-207ENST00000531727 LAMA2P24043 3122 aaKnown RBP19.82■□□□□ 0.76
CPSF1-207ENST00000531727 DCDC2CA8MYV0 355 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 ASGR1P07306 291 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 SLC16A2P36021 539 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 NKX3-2P78367 333 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 GNASQ5JWF2 1037 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
CPSF1-207ENST00000531727 TBC1D10CQ8IV04 446 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 TTC14Q96N46 770 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 RNF41Q9H4P4 317 aaPredicted RBP19.82■□□□□ 0.76
CPSF1-207ENST00000531727 GPCPD1Q9NPB8 672 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 TMEM39AQ9NV64 488 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 STXBP5LQ9Y2K9 1186 aa19.82■□□□□ 0.76
CPSF1-207ENST00000531727 MROH7Q68CQ1 1323 aa19.81■□□□□ 0.76
CPSF1-207ENST00000531727 CTAGE5O15320 804 aa19.81■□□□□ 0.76
CPSF1-207ENST00000531727 RAG1P15918 1043 aa19.81■□□□□ 0.76
CPSF1-207ENST00000531727 TNFAIP2Q03169 654 aa19.81■□□□□ 0.76
CPSF1-207ENST00000531727 NSMFQ6X4W1 530 aa19.81■□□□□ 0.76
CPSF1-207ENST00000531727 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-207ENST00000531727 ZNF213O14771 459 aa19.8■□□□□ 0.76
CPSF1-207ENST00000531727 PDHBP11177 359 aa19.8■□□□□ 0.76
CPSF1-207ENST00000531727 CDK7P50613 346 aa19.8■□□□□ 0.76
CPSF1-207ENST00000531727 SLC17A8Q8NDX2 589 aa19.8■□□□□ 0.76
CPSF1-207ENST00000531727 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
CPSF1-207ENST00000531727 A0A0U1RQG5 324 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-207ENST00000531727 SNHG28P0DPA3 235 aa19.79■□□□□ 0.76
CPSF1-207ENST00000531727 CWC27Q6UX04 472 aaKnown RBP19.79■□□□□ 0.76
CPSF1-207ENST00000531727 NOL8Q76FK4 1167 aaKnown RBP19.79■□□□□ 0.76
CPSF1-207ENST00000531727 ESR2Q92731 530 aa19.79■□□□□ 0.76
CPSF1-207ENST00000531727 VTI1AQ96AJ9 217 aa19.79■□□□□ 0.76
CPSF1-207ENST00000531727 GNEQ9Y223 722 aaKnown RBP19.79■□□□□ 0.76
CPSF1-207ENST00000531727 DDX49Q9Y6V7 483 aaKnown RBP19.79■□□□□ 0.76
CPSF1-207ENST00000531727 NEDD4P46934 1319 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 ARVCFO00192 962 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 HIP1O00291 1037 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 NT5C2P49902 561 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 EPHB4P54760 987 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 BEX3Q00994 111 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 FPGSQ05932 587 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 ZNF543Q08ER8 600 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 TLK2Q86UE8 772 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 MORC4Q8TE76 937 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 PURBQ96QR8 312 aaKnown RBP19.78■□□□□ 0.76
CPSF1-207ENST00000531727 TBX21Q9UL17 535 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 PNMA2Q9UL42 364 aa19.78■□□□□ 0.76
CPSF1-207ENST00000531727 NFIBO00712 420 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 BAATQ14032 418 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-207ENST00000531727 IQSEC1Q6DN90 963 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 TAPT1Q6NXT6 567 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 FBXO16Q8IX29 292 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-207ENST00000531727 AP5M1Q9H0R1 490 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 VTA1Q9NP79 307 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 PDGFCQ9NRA1 345 aa19.77■□□□□ 0.76
CPSF1-207ENST00000531727 ADD3Q9UEY8 706 aaKnown RBP19.77■□□□□ 0.76
CPSF1-207ENST00000531727 LOC102724159A0A0B4J2E5 919 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 TIMP1P01033 207 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 SMPD1P17405 629 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 ALDH5A1P51649 535 aaPredicted RBP19.76■□□□□ 0.75
CPSF1-207ENST00000531727 SMAD3P84022 425 aaKnown RBP19.76■□□□□ 0.75
CPSF1-207ENST00000531727 PWP2Q15269 919 aaKnown RBP19.76■□□□□ 0.75
CPSF1-207ENST00000531727 GPATCH4Q5T3I0 446 aaKnown RBP19.76■□□□□ 0.75
CPSF1-207ENST00000531727 ZNF697Q5TEC3 545 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 EEPD1Q7L9B9 569 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 DGKHQ86XP1 1220 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 CLEC4DQ8WXI8 215 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 RNPC3Q96LT9 517 aaKnown RBP19.76■□□□□ 0.75
CPSF1-207ENST00000531727 FAM161BQ96MY7 647 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 GUCD1Q96NT3 240 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 ZKSCAN3Q9BRR0 538 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 DSCC1Q9BVC3 393 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 Q9Y3F1 56 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 WDR19Q8NEZ3 1342 aa19.76■□□□□ 0.75
CPSF1-207ENST00000531727 CABYRO75952 493 aa19.75■□□□□ 0.75
CPSF1-207ENST00000531727 FSCN1Q16658 493 aaKnown RBP19.75■□□□□ 0.75
CPSF1-207ENST00000531727 CCDC178Q5BJE1 867 aa19.75■□□□□ 0.75
CPSF1-207ENST00000531727 FAM126BQ8IXS8 530 aa19.75■□□□□ 0.75
CPSF1-207ENST00000531727 PTPDC1A2A3K4 754 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 TLR3O15455 904 aaKnown RBP19.74■□□□□ 0.75
CPSF1-207ENST00000531727 DYNC1LI2O43237 492 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-207ENST00000531727 KDM4AO75164 1064 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 PTGS1P23219 599 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 MFSD5Q6N075 450 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 CXCL17Q6UXB2 119 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 SLC30A10Q6XR72 485 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 KIAA1211Q6ZU35 1233 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 IQCA1Q86XH1 822 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 SLC43A3Q8NBI5 491 aa19.74■□□□□ 0.75
CPSF1-207ENST00000531727 ZEB2O60315 1214 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 GOLGA8HP0CJ92 632 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms