RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	FOXN1	O15353	648 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	GADD45B	O75293	160 aa	Predicted RBP	10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	CNMD	O75829	334 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	ERVK-9	P63128	1117 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	ERVK-24	P63145	666 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	TMEM132B	Q14DG7	1078 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	FAM110C	Q1W6H9	321 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	UVSSA	Q2YD98	709 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	POTEE	Q6S8J3	1075 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	C17orf99	Q6UX52	265 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	TMTC3	Q6ZXV5	915 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	FERMT3	Q86UX7	667 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	TRIM22	Q8IYM9	498 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	ADGRF4	Q8IZF3	695 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	CPXCR1	Q8N123	301 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	LEO1	Q8WVC0	666 aa	Predicted RBP	10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	LZTS2	Q9BRK4	669 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	TSPY26P	Q9H489	355 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	SLC38A10	Q9HBR0	1119 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	GDPD2	Q9HCC8	539 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	NCOA5	Q9HCD5	579 aa	Known RBP	10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	RBM28	Q9NW13	759 aa	Known RBP	10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	MORF4L1	Q9UBU8	362 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	RCOR1	Q9UKL0	485 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474	ADAMTS5	Q9UNA0	930 aa		10.86	□□□□□ -0.67
NXF1-209	ENST00000531474		A0A0G2JMZ2	1700 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	FDX1	P10109	184 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	HSPA8	P11142	646 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	FDPS	P14324	419 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	IFNAR1	P17181	557 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	XBP1	P17861	261 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	NASP	P49321	788 aa	Predicted RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CTCF	P49711	727 aa	Predicted RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CCNA1	P78396	465 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	SP3	Q02447	781 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CDC37	Q16543	378 aa	Predicted RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	SLC35G1	Q2M3R5	365 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	SNRNP48	Q6IEG0	339 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	NBPF11	Q86T75	865 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	GAS2L3	Q86XJ1	694 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	HOMER1	Q86YM7	354 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CCAR1	Q8IX12	1150 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CMTR1	Q8N1G2	835 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	CCDC82	Q8N4S0	544 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	REPS2	Q8NFH8	660 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	PIBF1	Q8WXW3	757 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	TEX13B	Q9BXU2	312 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	SPATC1L	Q9H0A9	340 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	RANBP17	Q9H2T7	1088 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	JMJD4	Q9H9V9	463 aa		10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	RAVER2	Q9HCJ3	691 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	DDX19A	Q9NUU7	478 aa	Known RBP	10.85	□□□□□ -0.67
NXF1-209	ENST00000531474	FKTN	O75072	461 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	CDC27	P30260	824 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	ADD1	P35611	737 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	STAT3	P40763	770 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	OAZ1	P54368	228 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	CCDC173	Q0VFZ6	552 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	KIF22	Q14807	665 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	SAFB	Q15424	915 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474		Q3C1V9	767 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	NOM1	Q5C9Z4	860 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	WDR78	Q5VTH9	848 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	SRBD1	Q8N5C6	995 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	CD99L2	Q8TCZ2	262 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	AGBL1	Q96MI9	1066 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	SPZ1	Q9BXG8	430 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	RTEL1	Q9NZ71	1219 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	RBM27	Q9P2N5	1060 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	TFIP11	Q9UBB9	837 aa	Known RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	ZNF214	Q9UL59	606 aa	Predicted RBP	10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	CCPG1	Q9ULG6	757 aa		10.84	□□□□□ -0.67
NXF1-209	ENST00000531474	SYCE3	A1L190	88 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	CTAGE5	O15320	804 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	CYTH3	O43739	400 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	FMNL1	O95466	1100 aa	Predicted RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	YEATS4	O95619	227 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	CAVIN2	O95810	425 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	ICAM1	P05362	532 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	TAL1	P17542	331 aa	Predicted RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	LBX1	P52954	281 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	LACTB	P83111	547 aa	Predicted RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	AKAP17A	Q02040	695 aa	Known RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	QRICH1	Q2TAL8	776 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	NCAPG2	Q86XI2	1143 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	KCNG4	Q8TDN1	519 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	RRP36	Q96EU6	259 aa	Known RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	ERO1A	Q96HE7	468 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	CHAMP1	Q96JM3	812 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	PIGS	Q96S52	555 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	ALG1	Q9BT22	464 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	PORCN	Q9H237	461 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	RIOX1	Q9H6W3	641 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	EFCC1	Q9HA90	598 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	HOMER2	Q9NSB8	354 aa		10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	SEC63	Q9UGP8	760 aa	Known RBP	10.83	□□□□□ -0.68
NXF1-209	ENST00000531474	RLF	Q13129	1914 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms