RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 FBXO11Q86XK2 927 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 CNNM3Q8NE01 707 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 PYM1Q9BRP8 204 aaKnown RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 ZNF341Q9BYN7 854 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 GLIS2Q9BZE0 524 aaPredicted RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 KIAA1683Q9H0B3 1180 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 DNAJC25Q9H1X3 360 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 PCDHA1Q9Y5I3 950 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 SSC5DA1L4H1 1573 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 MEIS2O14770 477 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 OPLAHO14841 1288 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 RAD21O60216 631 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 ZNF165P49910 485 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 TRAF1Q13077 416 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 UBE2SQ16763 222 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 PPP4R3AQ6IN85 833 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 DTHD1Q6ZMT9 781 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 ANP32BQ92688 251 aaKnown RBP12.4□□□□□ -0.42
SRPRA-205ENST00000531104 MBOAT7Q96N66 472 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
SRPRA-205ENST00000531104 CYP3A7-CYP3A51PA0A087WV96 503 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 FOXN1O15353 648 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 AP5Z1O43299 807 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 NEMFO60524 1076 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 CCNT1O60563 726 aaKnown RBP12.39□□□□□ -0.43
SRPRA-205ENST00000531104 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 CYP3A7P24462 503 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 PNOCQ13519 176 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 POSTNQ15063 836 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 LETM2Q2VYF4 491 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 LUZP1Q86V48 1076 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 LPAR1Q92633 364 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 AK8Q96MA6 479 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
SRPRA-205ENST00000531104 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
SRPRA-205ENST00000531104 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
SRPRA-205ENST00000531104 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 A0A087WWV3 80 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 DDNO94850 711 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 GCFC2P16383 781 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 INPP5BP32019 993 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 USP11P51784 963 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 SNAP25P60880 206 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 NOL9Q5SY16 702 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 CCDC84Q86UT8 332 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 DHX40Q8IX18 779 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 P2RX7Q99572 595 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
SRPRA-205ENST00000531104 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 RNF181Q9P0P0 153 aa12.38□□□□□ -0.43
SRPRA-205ENST00000531104 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 SLC37A4O43826 429 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 TDP2O95551 362 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 FOSP01100 380 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-205ENST00000531104 BMP6P22004 513 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.436e-14■■■□□ 14.6
SRPRA-205ENST00000531104 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 IKQ13123 557 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-205ENST00000531104 MORC3Q14149 939 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 USP17L6PQ6QN14 398 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 PDILTQ8N807 584 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 TRIML1Q8N9V2 468 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 IQUBQ8NA54 791 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 DHX58Q96C10 678 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
SRPRA-205ENST00000531104 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-205ENST00000531104 C12orf42Q96LP6 360 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms