RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZNF648Q5T619 568 aaPredicted RBP10.84□□□□□ -0.67
CSDE1-213ENST00000530784 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
CSDE1-213ENST00000530784 ACTR10Q9NZ32 417 aa10.84□□□□□ -0.67
CSDE1-213ENST00000530784 TNFRSF10DQ9UBN6 386 aa10.84□□□□□ -0.67
CSDE1-213ENST00000530784 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
CSDE1-213ENST00000530784 FADS2P1A8MWK0 482 aa10.83□□□□□ -0.68
CSDE1-213ENST00000530784 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.83□□□□□ -0.68
CSDE1-213ENST00000530784 PPM1BO75688 479 aa10.83□□□□□ -0.68
CSDE1-213ENST00000530784 CEBPAP49715 358 aaPredicted RBP10.83□□□□□ -0.68
CSDE1-213ENST00000530784 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
CSDE1-213ENST00000530784 DIRC2Q96SL1 478 aa10.83□□□□□ -0.68
CSDE1-213ENST00000530784 GMLQ99445 158 aa10.83□□□□□ -0.68
CSDE1-213ENST00000530784 GPR55Q9Y2T6 319 aaPredicted RBP10.83□□□□□ -0.68
CSDE1-213ENST00000530784 ZCCHC11Q5TAX3 1644 aaKnown RBP10.83□□□□□ -0.68
CSDE1-213ENST00000530784 PPRC1Q5VV67 1664 aaKnown RBP10.82□□□□□ -0.68
CSDE1-213ENST00000530784 NRDCO43847 1150 aa10.82□□□□□ -0.68
CSDE1-213ENST00000530784 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-213ENST00000530784 RTP1P59025 263 aa10.82□□□□□ -0.68
CSDE1-213ENST00000530784 SNX17Q15036 470 aa10.82□□□□□ -0.68
CSDE1-213ENST00000530784 LARP1BQ659C4 914 aaKnown RBP10.82□□□□□ -0.68
CSDE1-213ENST00000530784 TMEM52Q8NDY8 209 aa10.82□□□□□ -0.68
CSDE1-213ENST00000530784 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
CSDE1-213ENST00000530784 YBX2Q9Y2T7 364 aaKnown RBP10.82□□□□□ -0.68
CSDE1-213ENST00000530784 CTTNBP2Q8WZ74 1663 aa10.82□□□□□ -0.68
CSDE1-213ENST00000530784 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 ANKRD34BA5PLL1 514 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 CD3EP07766 207 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 NOP2P46087 812 aaKnown RBP10.81□□□□□ -0.68
CSDE1-213ENST00000530784 POU4F1Q01851 419 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 MESP2Q0VG99 397 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 NCAPHQ15003 741 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 C6orf15Q6UXA7 325 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-213ENST00000530784 NLRX1Q86UT6 975 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 ZNF513Q8N8E2 541 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-213ENST00000530784 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
CSDE1-213ENST00000530784 KCNK12Q9HB15 430 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
CSDE1-213ENST00000530784 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 VAMP4O75379 141 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 IFNGR1P15260 489 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
CSDE1-213ENST00000530784 ARHGEF39Q8N4T4 335 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 PLCD4Q9BRC7 762 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 MCMBPQ9BTE3 642 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 CGGBP1Q9UFW8 167 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-213ENST00000530784 SUGT1Q9Y2Z0 365 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 WDR7Q9Y4E6 1490 aa10.8□□□□□ -0.68
CSDE1-213ENST00000530784 NAT16Q8N8M0 369 aa10.79□□□□□ -0.68
CSDE1-213ENST00000530784 INTS4Q96HW7 963 aaKnown RBP10.79□□□□□ -0.68
CSDE1-213ENST00000530784 RCC1LQ96I51 464 aaKnown RBP10.79□□□□□ -0.68
CSDE1-213ENST00000530784 KRTAP4-12Q9BQ66 201 aa10.79□□□□□ -0.68
CSDE1-213ENST00000530784 GOLGA2P5Q9HBQ8 144 aa10.79□□□□□ -0.68
CSDE1-213ENST00000530784 B2RBV5 119 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 HSF5Q4G112 596 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-213ENST00000530784 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 SLCO6A1Q86UG4 719 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 APBA2Q99767 749 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 SLC6A17Q9H1V8 727 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 PRXQ9BXM0 1461 aa10.78□□□□□ -0.68
CSDE1-213ENST00000530784 FGF10O15520 208 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-213ENST00000530784 DPY19L1Q2PZI1 675 aa10.77□□□□□ -0.69
CSDE1-213ENST00000530784 FAM84AQ96KN4 292 aa10.77□□□□□ -0.69
CSDE1-213ENST00000530784 DCP1AQ9NPI6 582 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-213ENST00000530784 A0A1W2PQ45 241 aaPredicted RBP10.76□□□□□ -0.69
CSDE1-213ENST00000530784 A0A1W2PQY0 241 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 WTIPA6NIX2 430 aaPredicted RBP10.76□□□□□ -0.69
CSDE1-213ENST00000530784 DDAH1O94760 285 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 C8AP07357 584 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 GALNT18Q6P9A2 607 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 JMJD8Q96S16 334 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 EPB41L4BQ9H329 900 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 TAF6LQ9Y6J9 622 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 ABCA8O94911 1581 aa10.76□□□□□ -0.69
CSDE1-213ENST00000530784 ADGRL1O94910 1474 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 STXBP3O00186 592 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 AURKAO14965 403 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 ZNF143P52747 638 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-213ENST00000530784 FXNQ16595 210 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 IRF2BP1Q8IU81 584 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 KRTAP19-1Q8IUB9 90 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 KSR1Q8IVT5 923 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 HNRNPLLQ8WVV9 542 aaKnown RBP10.75□□□□□ -0.69
CSDE1-213ENST00000530784 PTCHD1Q96NR3 888 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 CRTAC1Q9NQ79 661 aa10.75□□□□□ -0.69
CSDE1-213ENST00000530784 PDE6BP35913 854 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 AMPD2Q01433 879 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 GRB10Q13322 594 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 HLA-DQA1Q5Y7H0 255 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 ANKS3Q6ZW76 656 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 PPP1R14AQ96A00 147 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 LGR4Q9BXB1 951 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 EMC9Q9Y3B6 208 aa10.74□□□□□ -0.69
CSDE1-213ENST00000530784 NAT2P11245 290 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms