RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TXLNBQ8N3L3 684 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 GRAPLQ8TC17 118 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 CCDC47Q96A33 483 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 RPGRIP1Q96KN7 1286 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 ERGIC2Q96RQ1 377 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 PNKPQ96T60 521 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 EIF3CQ99613 913 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 ZNF287Q9HBT7 754 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 ABCB6Q9NP58 842 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 EXOC1Q9NV70 894 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 MAGEC2Q9UBF1 373 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 PUF60Q9UHX1 559 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 A0A0G2JS52 829 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 PP2D1A8MPX8 630 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 POLR3GO15318 223 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 GNA11P29992 359 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 USP14P54578 494 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 AMPD3Q01432 767 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 GRIK5Q16478 980 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 MUM1L1Q5H9M0 696 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 CENPPQ6IPU0 288 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 ZNF713Q8N859 430 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 TRIM9Q9C026 710 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 RIOX1Q9H6W3 641 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 C6orf50Q9HD87 102 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 SRP68Q9UHB9 627 aaKnown RBP9.38□□□□□ -0.91
CSTF3-208ENST00000528865 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
CSTF3-208ENST00000528865 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ABCB11O95342 1321 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 PVALEFA0A1B0GWK0 134 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 TARSL2A2RTX5 802 aaKnown RBP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 SMCO2A6NFE2 343 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 H3BQF6 201 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ZPR1O75312 459 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 LCA5LO95447 670 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 PLCG1P19174 1290 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 MCM3P25205 808 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 CYLC1P35663 651 aaPredicted RBP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 CDK8P49336 464 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 STK4Q13043 487 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 GPS2Q13227 327 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ANKRD40Q6AI12 368 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 HEATR3Q7Z4Q2 680 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 CSGALNACT2Q8N6G5 542 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 TGFBRAP1Q8WUH2 860 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 MTMR9Q96QG7 549 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 MMTAG2Q9BU76 263 aaKnown RBP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 EDEM3Q9BZQ6 932 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ZSWIM4Q9H7M6 989 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 VIPAS39Q9H9C1 493 aa9.37□□□□□ -0.91
CSTF3-208ENST00000528865 ZCCHC17Q9NP64 241 aaKnown RBP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 BAZ2BQ9UIF8 2168 aaKnown RBP9.37□□□□□ -0.91
CSTF3-208ENST00000528865 EDIL3O43854 480 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 EIF3JO75822 258 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 IL1R1P14778 569 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 PRLRP16471 622 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 PLCG2P16885 1265 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 VSNL1P62760 191 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ST5P78524 1137 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 PDE4DQ08499 809 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 PDIA5Q14554 519 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 VPS72Q15906 364 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 TXNRD1Q16881 649 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ARHGAP27Q6ZUM4 889 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ZNF572Q7Z3I7 529 aaPredicted RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ZNF804AQ7Z570 1209 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 NEK8Q86SG6 692 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 NOA1Q8NC60 698 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 RRP36Q96EU6 259 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 PNMA5Q96PV4 448 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 EYA3Q99504 573 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 AGPAT5Q9NUQ2 364 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ZNHIT6Q9NWK9 470 aaKnown RBP9.36□□□□□ -0.91
CSTF3-208ENST00000528865 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 ADAM21Q9UKJ8 722 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
CSTF3-208ENST00000528865 SAR1BQ9Y6B6 198 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms