RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PPP4R3BQ5MIZ7 849 aa18.35■□□□□ 0.53
CLNS1A-210ENST00000528364 NOL8Q76FK4 1167 aaKnown RBP18.35■□□□□ 0.53
CLNS1A-210ENST00000528364 EEPD1Q7L9B9 569 aa18.35■□□□□ 0.53
CLNS1A-210ENST00000528364 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
CLNS1A-210ENST00000528364 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 NSMFQ6X4W1 530 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 PCSK9Q8NBP7 692 aaKnown RBP18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 GLT1D1Q96MS3 346 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
CLNS1A-210ENST00000528364 ELP1O95163 1332 aa18.33■□□□□ 0.53
CLNS1A-210ENST00000528364 ASB14A6NK59 587 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 SMPD1P17405 629 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 FPGSQ05932 587 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 GNEQ9Y223 722 aaKnown RBP18.33■□□□□ 0.52
CLNS1A-210ENST00000528364 ARVCFO00192 962 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TIMP1P01033 207 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 ICAM1P05362 532 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TBC1D10CQ8IV04 446 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 RNPC3Q96LT9 517 aaKnown RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 CDX2Q99626 313 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TTYH1Q9H313 450 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TCP11L1Q9NUJ3 509 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 TBX21Q9UL17 535 aa18.32■□□□□ 0.52
CLNS1A-210ENST00000528364 CCDC171Q6TFL3 1326 aa18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 SDSP20132 328 aa18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 SMAD3P84022 425 aaKnown RBP18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 CXCL17Q6UXB2 119 aa18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 FBXO16Q8IX29 292 aaPredicted RBP18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
CLNS1A-210ENST00000528364 NFIBO00712 420 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 NKX3-2P78367 333 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
CLNS1A-210ENST00000528364 CUL9Q8IWT3 2517 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 GRIN2DO15399 1336 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 LAMA2P24043 3122 aaKnown RBP18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 PDHBP11177 359 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 TLK2Q86UE8 772 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 FAM126BQ8IXS8 530 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.524e-13■■□□□ 11.5
CLNS1A-210ENST00000528364 PPP1R12CQ9BZL4 782 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 CPVLQ9H3G5 476 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 LCTP09848 1927 aa18.29■□□□□ 0.52
CLNS1A-210ENST00000528364 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 ACRP10323 421 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 CSF2RAP15509 400 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 NUCB1Q02818 461 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 FSCN1Q16658 493 aaKnown RBP18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 IQSEC1Q6DN90 963 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 MFSD5Q6N075 450 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 MORC4Q8TE76 937 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 MYLIPQ8WY64 445 aa18.28■□□□□ 0.52
CLNS1A-210ENST00000528364 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 NEDD4P46934 1319 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 A0A0C4DFX4 3053 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 CD4P01730 458 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 CALML3P27482 149 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 CYP2C18P33260 490 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 PSMC6P62333 389 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 ZNF543Q08ER8 600 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 TMEM240Q5SV17 173 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 SLC43A3Q8NBI5 491 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 TTC14Q96N46 770 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 UBA5Q9GZZ9 404 aa18.27■□□□□ 0.52
CLNS1A-210ENST00000528364 MYO9BQ13459 2157 aa18.27■□□□□ 0.51
CLNS1A-210ENST00000528364 MROH7Q68CQ1 1323 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 GRXCR1A8MXD5 290 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 ALDH5A1P51649 535 aaPredicted RBP18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 ITGA7Q13683 1181 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 TRPV6Q9H1D0 765 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
CLNS1A-210ENST00000528364 UMODL1Q5DID0 1318 aa18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms