RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 NLRP5P59047 1200 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 APBA1Q02410 837 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 IFIT1BQ5T764 474 aaKnown RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 KDM7AQ6ZMT4 941 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 KCNB1Q14721 858 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 RNF187Q5TA31 235 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 NAA35Q5VZE5 725 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 TTI2Q6NXR4 508 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 YTHDF3Q7Z739 585 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 EEF2KMTQ96G04 330 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 RNPC3Q96LT9 517 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 SMARCAL1Q9NZC9 954 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 GPTP24298 496 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 IFT20Q8IY31 132 aa16.31■□□□□ 0.2
CAPN1-214ENST00000528165 CCDC43Q96MW1 224 aaKnown RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-214ENST00000528165 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 PSEN1P49768 467 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 GUCY1A3Q02108 690 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-214ENST00000528165 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 GLE1Q53GS7 698 aaKnown RBP16.3■□□□□ 0.2
CAPN1-214ENST00000528165 GIMAP8Q8ND71 665 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-214ENST00000528165 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
CAPN1-214ENST00000528165 PAGR1Q9BTK6 254 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
CAPN1-214ENST00000528165 DONSONQ9NYP3 566 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
CAPN1-214ENST00000528165 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 CALM1P0DP23 149 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 CALM2P0DP24 149 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 CALM3P0DP25 149 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
CAPN1-214ENST00000528165 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-214ENST00000528165 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
CAPN1-214ENST00000528165 CHUKO15111 745 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 PPP1R37O75864 691 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 NR1D1P20393 614 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 FIGNQ5HY92 759 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 C2CD5Q86YS7 1000 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 TACO1Q9BSH4 297 aaKnown RBP16.29■□□□□ 0.2
CAPN1-214ENST00000528165 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
CAPN1-214ENST00000528165 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-214ENST00000528165 KIF11P52732 1056 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 IQCKQ8N0W5 287 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 DUSP9Q99956 384 aaKnown RBP16.28■□□□□ 0.2
CAPN1-214ENST00000528165 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 ZNF233A6NK53 670 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 KLRC4O43908 158 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 AKR1B10O60218 316 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 MYL1P05976 194 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 FGFR2P21802 821 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 PAK2Q13177 524 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 PTGISQ16647 500 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 IQCA1Q86XH1 822 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 PLAGL2Q9UPG8 496 aa16.28■□□□□ 0.2
CAPN1-214ENST00000528165 NCK2O43639 380 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 TROAPQ12815 778 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 IFT81Q8WYA0 676 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 P2RX5Q93086 422 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 VCPKMTQ9H867 229 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 MROH5Q6ZUA9 1318 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CFAP221Q4G0U5 840 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 NLRP14Q86W24 1093 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 NLRP10Q86W26 655 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CCT8L2Q96SF2 557 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms