RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	CARF	Q8N187	725 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FAM43A	Q8N2R8	423 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	TTC9B	Q8N6N2	239 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GOLM1	Q8NBJ4	401 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	MEIS1	O00470	390 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	NCAM1	P13591	858 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ZNF20	P17024	532 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	DAB2	P98082	770 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	HLA-DQA1	Q5Y7H0	255 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FAM196A	Q6ZSG2	479 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	AEBP1	Q8IUX7	1158 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	SAMD11	Q96NU1	681 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CNNM2	Q9H8M5	875 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GFOD1	Q9NXC2	390 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PRR13	Q9NZ81	148 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	USP35	Q9P2H5	1018 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PARP2	Q9UGN5	583 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	NOP58	Q9Y2X3	529 aa	Known RBP	4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299	IVNS1ABP	Q9Y6Y0	642 aa		4.92	□□□□□ -1.62
CLNS1A-209	ENST00000527299		A0A1W2PQ27	194 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299		A0A1W2PQ64	194 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299		A0A1W2PQC6	194 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299		A0A1W2PQD8	194 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GJA9	P57773	515 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PWP1	Q13610	501 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	EAPP	Q56P03	285 aa	Predicted RBP	4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	SNAP47	Q5SQN1	464 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	OVOS1	Q6IE37	1185 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CRTC3	Q6UUV7	619 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	LRRC3	Q9BY71	257 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PRDM4	Q9UKN5	801 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FAN1	Q9Y2M0	1017 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PCDHB14	Q9Y5E9	798 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PCDHB12	Q9Y5F1	795 aa		4.91	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ASGR2	P07307	311 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	PRR5	P85299	388 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CWF19L2	Q2TBE0	894 aa	Known RBP	4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	B3GNT8	Q7Z7M8	397 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	TMEM192	Q8IY95	271 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ATG4C	Q96DT6	458 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	C8orf49	Q96NF6	230 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ARID3A	Q99856	593 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ANTXR1	Q9H6X2	564 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	BRMS1	Q9HCU9	246 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	PDLIM7	Q9NR12	457 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	FBXL21	Q9UKT6	434 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ROBO2	Q9HCK4	1378 aa		4.9	□□□□□ -1.63
CLNS1A-209	ENST00000527299		F8W031	263 aa	Predicted RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	TLR3	O15455	904 aa	Known RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	GSN	P06396	782 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NCL	P19338	710 aa	Known RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	MC3R	P41968	323 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	HMGA2	P52926	109 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	PSMD2	Q13200	908 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	BICRAL	Q6AI39	1079 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ZNF761	Q86XN6	746 aa	Predicted RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	FTSJ3	Q8IY81	847 aa	Known RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SLC12A9	Q9BXP2	914 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	MKRN2	Q9H000	416 aa	Known RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	EHMT1	Q9H9B1	1298 aa		4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.89	□□□□□ -1.63
CLNS1A-209	ENST00000527299	MINDY4B	A8MYZ0	360 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	PLAT	P00750	562 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	GSTM1	P09488	218 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CANX	P27824	592 aa	Known RBP	4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SARS	P49591	514 aa	Known RBP	4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CORO7	P57737	925 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	AUH	Q13825	339 aa	Known RBP	4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NLRC3	Q7RTR2	1065 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	TMC4	Q7Z404	712 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	JAML	Q86YT9	394 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NAT16	Q8N8M0	369 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	LOXL4	Q96JB6	756 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SLC6A18	Q96N87	628 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SRRT	Q9BXP5	876 aa	Known RBP	4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	KCNQ5	Q9NR82	932 aa		4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.88	□□□□□ -1.63
CLNS1A-209	ENST00000527299		A0A1W2PQJ5	194 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	PPM1G	O15355	546 aa	Predicted RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	FGF10	O15520	208 aa	Predicted RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SLPI	P03973	132 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	C6	P13671	934 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CNGB1	Q14028	1251 aa	Predicted RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	FBXL19	Q6PCT2	694 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CYP2R1	Q6VVX0	501 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NLGN2	Q8NFZ4	835 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	MENT	Q9BUN1	341 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CHMP4B	Q9H444	224 aa	Known RBP	4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NTM	Q9P121	344 aa		4.87	□□□□□ -1.63
CLNS1A-209	ENST00000527299	CYR61	O00622	381 aa		4.86	□□□□□ -1.63
CLNS1A-209	ENST00000527299	TNFRSF10C	O14798	259 aa		4.86	□□□□□ -1.63
CLNS1A-209	ENST00000527299	GREM1	O60565	184 aa		4.86	□□□□□ -1.63
CLNS1A-209	ENST00000527299	HSP90AA1	P07900	732 aa	Known RBP	4.86	□□□□□ -1.63
CLNS1A-209	ENST00000527299	HMGB1	P09429	215 aa	Known RBP	4.86	□□□□□ -1.63
CLNS1A-209	ENST00000527299	NME1	P15531	152 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms