RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 AURKAO14965 403 aa8.6□□□□□ -1.03
COPB1-203ENST00000525214 SMAD7O15105 426 aaKnown RBP8.6□□□□□ -1.03
COPB1-203ENST00000525214 PPM1BO75688 479 aa8.6□□□□□ -1.03
COPB1-203ENST00000525214 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
COPB1-203ENST00000525214 RCC1LQ96I51 464 aaKnown RBP8.6□□□□□ -1.03
COPB1-203ENST00000525214 TINF2Q9BSI4 451 aa8.6□□□□□ -1.03
COPB1-203ENST00000525214 STXBP3O00186 592 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 ARL4AP40617 200 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 DPY19L1Q2PZI1 675 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 KRTAP19-4Q3LI73 84 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 TMEM132EQ6IEE7 984 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
COPB1-203ENST00000525214 ANKRD34BA5PLL1 514 aa8.58□□□□□ -1.04
COPB1-203ENST00000525214 MPOP05164 745 aa8.58□□□□□ -1.04
COPB1-203ENST00000525214 EPHB3P54753 998 aa8.58□□□□□ -1.04
COPB1-203ENST00000525214 GRB10Q13322 594 aa8.58□□□□□ -1.04
COPB1-203ENST00000525214 JAMLQ86YT9 394 aa8.58□□□□□ -1.04
COPB1-203ENST00000525214 FGRP09769 529 aa8.57□□□□□ -1.04
COPB1-203ENST00000525214 RBM25P49756 843 aaKnown RBP8.57□□□□□ -1.04
COPB1-203ENST00000525214 CBX2Q14781 532 aaPredicted RBP8.57□□□□□ -1.04
COPB1-203ENST00000525214 EEF1DP3Q658K8 133 aa8.57□□□□□ -1.04
COPB1-203ENST00000525214 ZSCAN18Q8TBC5 510 aaPredicted RBP8.57□□□□□ -1.04
COPB1-203ENST00000525214 SUGT1Q9Y2Z0 365 aa8.57□□□□□ -1.04
COPB1-203ENST00000525214 NUDT19A8MXV4 375 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 ZSCAN22P10073 491 aaPredicted RBP8.56□□□□□ -1.04
COPB1-203ENST00000525214 ETFBP38117 255 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 AMPD2Q01433 879 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 SSPNQ14714 243 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 RAB3GAP1Q15042 981 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 RPTNQ6XPR3 784 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 IGSF5Q9NSI5 407 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 SIRT5Q9NXA8 310 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 BACE2Q9Y5Z0 518 aa8.56□□□□□ -1.04
COPB1-203ENST00000525214 B2RBV5 119 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 ABLIM1O14639 778 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 TBC1D8O95759 1140 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 SSBP05455 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
COPB1-203ENST00000525214 CDR1P51861 262 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 NCAPHQ15003 741 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 FBLN7Q53RD9 439 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 CIAPIN1Q6FI81 312 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 C6orf15Q6UXA7 325 aaPredicted RBP8.55□□□□□ -1.04
COPB1-203ENST00000525214 TMC6Q7Z403 805 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 LGR4Q9BXB1 951 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 PRKAG3Q9UGI9 489 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 AKT3Q9Y243 479 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 EMC9Q9Y3B6 208 aa8.55□□□□□ -1.04
COPB1-203ENST00000525214 A0A1W2PQ27 194 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 A0A1W2PQ64 194 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 A0A1W2PQC6 194 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 A0A1W2PQD8 194 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 C2orf71A6NGG8 1288 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 DBHP09172 617 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 L1CAMP32004 1257 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 ZNF143P52747 638 aaPredicted RBP8.54□□□□□ -1.04
COPB1-203ENST00000525214 CORO7P57737 925 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 PLEKHN1Q494U1 663 aaPredicted RBP8.54□□□□□ -1.04
COPB1-203ENST00000525214 LCE4AQ5TA78 99 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 AMIGO3Q86WK7 504 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 NLGN2Q8NFZ4 835 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.54□□□□□ -1.047e-7■■■■□ 20.9
COPB1-203ENST00000525214 ACTR10Q9NZ32 417 aa8.54□□□□□ -1.04
COPB1-203ENST00000525214 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
COPB1-203ENST00000525214 N4BP3O15049 544 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 SRGAP3O43295 1099 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 NUAK1O60285 661 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 KCNH1O95259 989 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 TACR1P25103 407 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 SEPHS1P49903 392 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
COPB1-203ENST00000525214 OLFML2BQ68BL8 750 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 SIAH1Q8IUQ4 282 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 BVESQ8NE79 360 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 APBA2Q99767 749 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 IRF2BPLQ9H1B7 796 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 HCFC2Q9Y5Z7 792 aa8.53□□□□□ -1.04
COPB1-203ENST00000525214 IRS4O14654 1257 aaPredicted RBP8.52□□□□□ -1.05
COPB1-203ENST00000525214 PPP1R11O60927 126 aaPredicted RBP8.52□□□□□ -1.05
COPB1-203ENST00000525214 TNNI3KQ59H18 835 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 LARP1BQ659C4 914 aaKnown RBP8.52□□□□□ -1.05
COPB1-203ENST00000525214 LDHDQ86WU2 507 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 IGDCC3Q8IVU1 814 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 MZB1Q8WU39 189 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 COPS5Q92905 334 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 SIGLEC10Q96LC7 697 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 EPB41L4AQ9HCS5 686 aaPredicted RBP8.52□□□□□ -1.05
COPB1-203ENST00000525214 KCTD3Q9Y597 815 aa8.52□□□□□ -1.05
COPB1-203ENST00000525214 CYBBP04839 570 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 PI3P19957 117 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 MAPKAPK2P49137 400 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 TMEM62Q0P6H9 643 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms