RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
VPS11-201ENST00000524454 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
VPS11-201ENST00000524454 LRRC2Q9BYS8 371 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 INCENPQ9NQS7 918 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 GABRQQ9UN88 632 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 PLIN4Q96Q06 1357 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
VPS11-201ENST00000524454 RLFQ13129 1914 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 DOCK3Q8IZD9 2030 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 GOLGA8AA7E2F4 631 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 TNKSO95271 1327 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 YEATS4O95619 227 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 FDPSP14324 419 aaKnown RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 VCAM1P19320 739 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 RASA1P20936 1047 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 PRKCZQ05513 592 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 CTDSPL2Q05D32 466 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 PKN2Q16513 984 aaKnown RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 ZSCAN23Q3MJ62 389 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 CCDC183Q5T5S1 534 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 CATIPQ7Z7H3 387 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 SIAH1Q8IUQ4 282 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 SPICE1Q8N0Z3 855 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 C8orf76Q96K31 380 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 P2RX7Q99572 595 aaKnown RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 PAGR1Q9BTK6 254 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 TXNRD2Q9NNW7 524 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 NPDC1Q9NQX5 325 aaPredicted RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 ORC3Q9UBD5 711 aaPredicted RBP8.16□□□□□ -1.1
VPS11-201ENST00000524454 SWAP70Q9UH65 585 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 SLC45A1Q9Y2W3 748 aa8.16□□□□□ -1.1
VPS11-201ENST00000524454 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 MYPNQ86TC9 1320 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 PPP1R3GB7ZBB8 358 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 C19orf81C9J6K1 198 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 GPR37O15354 613 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 RAD21O60216 631 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 DEXIO95424 95 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 CAVIN2O95810 425 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 XBP1P17861 261 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 U2AF2P26368 475 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS11-201ENST00000524454 KIF5BP33176 963 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 NOVP48745 357 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 HERVK_113P62684 666 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 ICA1Q05084 483 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 RTN1Q16799 776 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 CAVIN1Q6NZI2 390 aaKnown RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 TMEM179Q6ZVK1 233 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 CHST3Q7LGC8 479 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 ZNF654Q8IZM8 581 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 ENAHQ8N8S7 591 aaPredicted RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 FANCBQ8NB91 859 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 KCNG4Q8TDN1 519 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 SPATA32Q96LK8 384 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 ZBED2Q9BTP6 218 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS11-201ENST00000524454 KIAA1683Q9H0B3 1180 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 RPAP3Q9H6T3 665 aaPredicted RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 NCOA5Q9HCD5 579 aaKnown RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 GINM1Q9NU53 330 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 DDX19AQ9NUU7 478 aaKnown RBP8.15□□□□□ -1.1
VPS11-201ENST00000524454 RTEL1Q9NZ71 1219 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 PCDH10Q9P2E7 1040 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 RCOR1Q9UKL0 485 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 TACC3Q9Y6A5 838 aa8.15□□□□□ -1.1
VPS11-201ENST00000524454 A0A1W2PQ27 194 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 A0A1W2PQ64 194 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 A0A1W2PQD8 194 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 EEF2P13639 858 aaKnown RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 HOXA7P31268 230 aaPredicted RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 NASPP49321 788 aaPredicted RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 GNAQP50148 359 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 FCGRTP55899 365 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 CCT2P78371 535 aaKnown RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 TROAPQ12815 778 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.111e-6■□□□□ 9.5
VPS11-201ENST00000524454 TRIM29Q14134 588 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 Q3C1V9 767 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 SLC9C1Q4G0N8 1177 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 IFIT1BQ5T764 474 aaKnown RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 MICU3Q86XE3 530 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 LEO1Q8WVC0 666 aaPredicted RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 C12orf42Q96LP6 360 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 NUP88Q99567 741 aaPredicted RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 LZTS2Q9BRK4 669 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 TANGO6Q9C0B7 1094 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 GRPEL1Q9HAV7 217 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 453.8 ms