RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 DCDC2CA8MYV0 355 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 PTGS1P23219 599 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 GNASQ5JWF2 1037 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 BTNL9Q6UXG8 535 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 PCSK9Q8NBP7 692 aaKnown RBP22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 GLT1D1Q96MS3 346 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 RANBP17Q9H2T7 1088 aaKnown RBP22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 SPC25Q9HBM1 224 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 CCPG1Q9ULG6 757 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 FRMPD2Q68DX3 1309 aaPredicted RBP22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 ASB14A6NK59 587 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 ICAM1P05362 532 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 TOP1P11387 765 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 NKX3-2P78367 333 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 BEX3Q00994 111 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 TNFAIP2Q03169 654 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 TBC1D10CQ8IV04 446 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 PLEKHM2Q8IWE5 1019 aa22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 RWDD1Q9H446 243 aaPredicted RBP22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 GNEQ9Y223 722 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-206ENST00000524028 MCM3APO60318 1980 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 SDSP20132 328 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 FPGSQ05932 587 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 AAMPQ13685 434 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 TMEM63BQ5T3F8 832 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 ZNF697Q5TEC3 545 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 NSMFQ6X4W1 530 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 CHD1LQ86WJ1 897 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 GPCPD1Q9NPB8 672 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 PDGFCQ9NRA1 345 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 TBX21Q9UL17 535 aa22.16■■□□□ 1.14
PTP4A3-206ENST00000524028 SMPD1P17405 629 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 SMAD3P84022 425 aaKnown RBP22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 NUCB1Q02818 461 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 AKNAD1Q5T1N1 836 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 SYDE2Q5VT97 1194 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 TAPT1Q6NXT6 567 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 EEPD1Q7L9B9 569 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 VTI1AQ96AJ9 217 aa22.15■■□□□ 1.14
PTP4A3-206ENST00000524028 A0A0U1RQG5 324 aaPredicted RBP22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 ARVCFO00192 962 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 TIMP1P01033 207 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 PDHBP11177 359 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 NOL8Q76FK4 1167 aaKnown RBP22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 RNPC3Q96LT9 517 aaKnown RBP22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 SEMA6BQ9H3T3 888 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 OSBPL3Q9H4L5 887 aa22.14■■□□□ 1.13
PTP4A3-206ENST00000524028 DLL1O00548 723 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 NFIBO00712 420 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 BAATQ14032 418 aaPredicted RBP22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 TLK2Q86UE8 772 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 FBXO16Q8IX29 292 aaPredicted RBP22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 FAM126BQ8IXS8 530 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 MORC4Q8TE76 937 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 TTC14Q96N46 770 aa22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 TTYH1Q9H313 450 aaPredicted RBP22.13■■□□□ 1.13
PTP4A3-206ENST00000524028 NEDD4P46934 1319 aa22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 MROH7Q68CQ1 1323 aa22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 DYNC1LI2O43237 492 aaPredicted RBP22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 CXCL17Q6UXB2 119 aa22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 CLEC4DQ8WXI8 215 aa22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 CDX2Q99626 313 aaPredicted RBP22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 A0A0C4DFX4 3053 aa22.12■■□□□ 1.13
PTP4A3-206ENST00000524028 SNHG28P0DPA3 235 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 IQSEC1Q6DN90 963 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 MFSD5Q6N075 450 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 C16orf59Q7L2K0 433 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 SLC43A3Q8NBI5 491 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 ZKSCAN3Q9BRR0 538 aa22.11■■□□□ 1.13
PTP4A3-206ENST00000524028 GRIN2DO15399 1336 aa22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 LRRC37A2A6NM11 1700 aa22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 CD4P01730 458 aa22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 FSCN1Q16658 493 aaKnown RBP22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 CWC27Q6UX04 472 aaKnown RBP22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.1■■□□□ 1.136e-9■■■□□ 14.9
PTP4A3-206ENST00000524028 AP5M1Q9H0R1 490 aa22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 VTA1Q9NP79 307 aa22.1■■□□□ 1.13
PTP4A3-206ENST00000524028 ZNF213O14771 459 aa22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 ALDH5A1P51649 535 aaPredicted RBP22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 MFAP1P55081 439 aaKnown RBP22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 SLC30A10Q6XR72 485 aa22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 ESR2Q92731 530 aa22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 RNF41Q9H4P4 317 aaPredicted RBP22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 Q9Y3F1 56 aa22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 LCTP09848 1927 aa22.09■■□□□ 1.13
PTP4A3-206ENST00000524028 PTPDC1A2A3K4 754 aa22.08■■□□□ 1.13
PTP4A3-206ENST00000524028 GOLGA8HP0CJ92 632 aa22.08■■□□□ 1.13
PTP4A3-206ENST00000524028 CSF2RAP15509 400 aa22.08■■□□□ 1.13
PTP4A3-206ENST00000524028 KIAA1211Q6ZU35 1233 aa22.08■■□□□ 1.13
PTP4A3-206ENST00000524028 PPP1R12CQ9BZL4 782 aa22.08■■□□□ 1.13
PTP4A3-206ENST00000524028 TLR3O15455 904 aaKnown RBP22.07■■□□□ 1.12
PTP4A3-206ENST00000524028 CABYRO75952 493 aa22.07■■□□□ 1.12
PTP4A3-206ENST00000524028 CALML3P27482 149 aa22.07■■□□□ 1.12
PTP4A3-206ENST00000524028 PSMC6P62333 389 aa22.07■■□□□ 1.12
PTP4A3-206ENST00000524028 ITGA7Q13683 1181 aa22.07■■□□□ 1.12
PTP4A3-206ENST00000524028 TMEM240Q5SV17 173 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms