RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PDE8AO60658 829 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 GJA8P48165 433 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 IREB2P48200 963 aaKnown RBP8.17□□□□□ -1.1
VPS13B-211ENST00000522802 CCT4P50991 539 aaKnown RBP8.17□□□□□ -1.1
VPS13B-211ENST00000522802 CTSWP56202 376 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 HYAL2Q12891 473 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
VPS13B-211ENST00000522802 VGLL4Q14135 290 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 DLGAP5Q15398 846 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 FAM35AQ86V20 835 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 DEFB123Q8N688 67 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 HTATIP2Q9BUP3 242 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 PCGF6Q9BYE7 350 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 VEZTQ9HBM0 779 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 PHF20L1A8MW92 1017 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 F8W031 263 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 J3QW42 95 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 EREGO14944 169 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 FARP2O94887 1054 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 CCL5P13501 91 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 ORC1Q13415 861 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 RASA3Q14644 834 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 TTLL5Q6EMB2 1281 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 CEP120Q8N960 986 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 NEDD1Q8NHV4 660 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 MYD88Q99836 296 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 GREM2Q9H772 168 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 BABAM1Q9NWV8 329 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-211ENST00000522802 STAP2Q9UGK3 403 aa8.16□□□□□ -1.1
VPS13B-211ENST00000522802 IRS2Q9Y4H2 1338 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 TLR2O60603 784 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 CPB1P15086 417 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 RIPK4P57078 832 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 ARHGEF6Q15052 776 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 SUPT20HL1Q3ZLR7 823 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 PERM1Q5SV97 790 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 XP32Q5T750 250 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 TMCO4Q5TGY1 634 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 TTC9Q92623 222 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 PRMT6Q96LA8 375 aaPredicted RBP8.15□□□□□ -1.1
VPS13B-211ENST00000522802 CDC5LQ99459 802 aaKnown RBP8.15□□□□□ -1.1
VPS13B-211ENST00000522802 DNAJC25Q9H1X3 360 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
VPS13B-211ENST00000522802 BSDC1Q9NW68 430 aaPredicted RBP8.15□□□□□ -1.1
VPS13B-211ENST00000522802 FRRS1LQ9P0K9 344 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 JAG2Q9Y219 1238 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 STXBP5LQ9Y2K9 1186 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 NR2E3Q9Y5X4 410 aa8.15□□□□□ -1.1
VPS13B-211ENST00000522802 ADGRA2Q96PE1 1338 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 ANKRD33BA6NCL7 494 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 BTBD19C9JJ37 291 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 SNAP23O00161 211 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 CHL1O00533 1208 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 GJB1P08034 283 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 AMPD1P23109 780 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 GRK4P32298 578 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 DGKGP49619 791 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 MMP14P50281 582 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 GTF2A2P52657 109 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 PSAPL1Q6NUJ1 521 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 U2AF1L4Q8WU68 220 aaKnown RBP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 TEPSINQ96N21 525 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 RNF208Q9H0X6 261 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 PRDM6Q9NQX0 595 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 HYPKQ9NX55 129 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 CWC25Q9NXE8 425 aaPredicted RBP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 SRRDQ9UH36 339 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 DDX60LQ5H9U9 1706 aaKnown RBP8.14□□□□□ -1.11
VPS13B-211ENST00000522802 DNAH12Q6ZR08 3092 aa8.14□□□□□ -1.11
VPS13B-211ENST00000522802 TTC28Q96AY4 2481 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 MYPNQ86TC9 1320 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 M0R082 166 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 EIF1AYO14602 144 aaKnown RBP8.13□□□□□ -1.11
VPS13B-211ENST00000522802 MYO1BO43795 1136 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 ALBP02768 609 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 HOXB7P09629 217 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 HSP90B1P14625 803 aaKnown RBP8.13□□□□□ -1.11
VPS13B-211ENST00000522802 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
VPS13B-211ENST00000522802 KIF22Q14807 665 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 COL19A1Q14993 1142 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 ELMSAN1Q6PJG2 1045 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 NCAPG2Q86XI2 1143 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms