RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	PDE4B	Q07343	736 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	NMI	Q13287	307 aa	Predicted RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	B4GALNT3	Q6L9W6	998 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	TAPT1	Q6NXT6	567 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	NSMF	Q6X4W1	530 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	NOL8	Q76FK4	1167 aa	Known RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	CHST13	Q8NET6	341 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	MAFA	Q8NHW3	353 aa	Predicted RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	VWCE	Q96DN2	955 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	ZKSCAN3	Q9BRR0	538 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	TRPV6	Q9H1D0	765 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	UPF3A	Q9H1J1	476 aa	Known RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	ACAD9	Q9H845	621 aa		11.98	□□□□□ -0.49
CLU-213	ENST00000522502	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	GNE	Q9Y223	722 aa	Known RBP	11.98	□□□□□ -0.49
CLU-213	ENST00000522502	ARVCF	O00192	962 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	ERC2	O15083	957 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	DYNC1LI2	O43237	492 aa	Predicted RBP	11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TIMP1	P01033	207 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	FGA	P02671	866 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	COPB2	P35606	906 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TNFAIP2	Q03169	654 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	CCDC96	Q2M329	555 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TMEM240	Q5SV17	173 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	RCSD1	Q6JBY9	416 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CLU-213	ENST00000522502	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TBC1D10C	Q8IV04	446 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	FAM126B	Q8IXS8	530 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	COPS5	Q92905	334 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	GMCL1	Q96IK5	515 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	YTHDC1	Q96MU7	727 aa	Known RBP	11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TMEM47	Q9BQJ4	181 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TSEN34	Q9BSV6	310 aa	Known RBP	11.97	□□□□□ -0.49
CLU-213	ENST00000522502	NACAP1	Q9BZK3	213 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	LNPK	Q9C0E8	428 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	ABHD16B	Q9H3Z7	469 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	TOMM22	Q9NS69	142 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	CYP39A1	Q9NYL5	469 aa		11.97	□□□□□ -0.49
CLU-213	ENST00000522502	DCDC2C	A8MYV0	355 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	IGHD	P01880	384 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	GOLGA8H	P0CJ92	632 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	MYOG	P15173	224 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	CST5	P28325	142 aa	Predicted RBP	11.96	□□□□□ -0.49
CLU-213	ENST00000522502	CCL23	P55773	120 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	SMAD3	P84022	425 aa	Known RBP	11.96	□□□□□ -0.49
CLU-213	ENST00000522502	BAAT	Q14032	418 aa	Predicted RBP	11.96	□□□□□ -0.49
CLU-213	ENST00000522502	SLC30A10	Q6XR72	485 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	ZNF365	Q70YC5	407 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	MSL3	Q8N5Y2	521 aa	Known RBP	11.96	□□□□□ -0.49
CLU-213	ENST00000522502	PPM1E	Q8WY54	764 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	TBC1D5	Q92609	795 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	CCPG1	Q9ULG6	757 aa		11.96	□□□□□ -0.49
CLU-213	ENST00000522502	TET1	Q8NFU7	2136 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	NEDD4	P46934	1319 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502		A0A0U1RQG5	324 aa	Predicted RBP	11.95	□□□□□ -0.5
CLU-213	ENST00000522502	MOXD2P	A6NHM9	499 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	CD4	P01730	458 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	HSPD1	P10809	573 aa	Known RBP	11.95	□□□□□ -0.5
CLU-213	ENST00000522502	DNAJB2	P25686	324 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	NOV	P48745	357 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	RABGGTB	P53611	331 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	OAZ1	P54368	228 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	MFSD5	Q6N075	450 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	TLK2	Q86UE8	772 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	NUP133	Q8WUM0	1156 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	CLEC4D	Q8WXI8	215 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	SCLY	Q96I15	445 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	GLT1D1	Q96MS3	346 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	TOX2	Q96NM4	488 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	PBX4	Q9BYU1	374 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	WNT8A	Q9H1J5	351 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	IL25	Q9H293	177 aa		11.95	□□□□□ -0.5
CLU-213	ENST00000522502	TRIP12	Q14669	1992 aa	Predicted RBP	11.94	□□□□□ -0.5
CLU-213	ENST00000522502	B4GALT4	O60513	344 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	FGR	P09769	529 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	FOSL2	P15408	326 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	CALML3	P27482	149 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	FSCN1	Q16658	493 aa	Known RBP	11.94	□□□□□ -0.5
CLU-213	ENST00000522502	KIAA1211	Q6ZU35	1233 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	FAM160B2	Q86V87	743 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	CHURC1	Q8WUH1	139 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	RILPL2	Q969X0	211 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	EVI5L	Q96CN4	794 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	UBA5	Q9GZZ9	404 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	RANBP17	Q9H2T7	1088 aa	Known RBP	11.94	□□□□□ -0.5
CLU-213	ENST00000522502	PRDM12	Q9H4Q4	367 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	ZNF287	Q9HBT7	754 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	TRMT13	Q9NUP7	481 aa	Known RBP	11.94	□□□□□ -0.5
CLU-213	ENST00000522502	FBXO40	Q9UH90	709 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	ANAPC4	Q9UJX5	808 aa		11.94	□□□□□ -0.5
CLU-213	ENST00000522502	YBX2	Q9Y2T7	364 aa	Known RBP	11.94	□□□□□ -0.5
CLU-213	ENST00000522502	ELP1	O95163	1332 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	PTPDC1	A2A3K4	754 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	TRIM6-TRIM34	B2RNG4	842 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	ORC4	O43929	436 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	SLC3A2	P08195	630 aa	Known RBP	11.93	□□□□□ -0.5
CLU-213	ENST00000522502	PDHB	P11177	359 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	CYP2C9	P11712	490 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	ITGA7	Q13683	1181 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms