RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
CD74-208ENST00000522246 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
CD74-208ENST00000522246 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 TNFRSF25Q93038 417 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
CD74-208ENST00000522246 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 PTPRFP10586 1907 aa12.13□□□□□ -0.47
CD74-208ENST00000522246 ELP1O95163 1332 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 YEATS4O95619 227 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 YY1P25490 414 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 COPB2P35606 906 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 ORC2Q13416 577 aaPredicted RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
CD74-208ENST00000522246 USH1GQ495M9 461 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 TREML2Q5T2D2 321 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 ANKRD23Q86SG2 305 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
CD74-208ENST00000522246 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
CD74-208ENST00000522246 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 GOLGA6L4A6NEF3 574 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 GJA5P36382 358 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 STAT3P40763 770 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 SNAP25P60880 206 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 DGKZQ13574 1117 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 MOGSQ13724 837 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 SLC39A14Q15043 492 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 STK38Q15208 465 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 SF3A1Q15459 793 aaKnown RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 CCL15Q16663 113 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 REPS2Q8NFH8 660 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 USP28Q96RU2 1077 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
CD74-208ENST00000522246 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 ZNF536O15090 1300 aa12.11□□□□□ -0.47
CD74-208ENST00000522246 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
CD74-208ENST00000522246 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 FIBPO43427 364 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 PPP6R2O75170 966 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 SLC25A27O95847 323 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 USP11P51784 963 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 HERVK_113P62684 666 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 GHRHRQ02643 423 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 LINC00301Q8NCQ3 95 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
CD74-208ENST00000522246 RAVER2Q9HCJ3 691 aaKnown RBP12.1□□□□□ -0.47
CD74-208ENST00000522246 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
CD74-208ENST00000522246 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 RABGAP1Q9Y3P9 1069 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
CD74-208ENST00000522246 LAD1O00515 517 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 MEIS2O14770 477 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 SPTLC2O15270 562 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 MBD3O95983 291 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 ALAS1P13196 640 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
CD74-208ENST00000522246 TOB1P50616 345 aaPredicted RBP12.09□□□□□ -0.47
CD74-208ENST00000522246 UBE2HP62256 183 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
CD74-208ENST00000522246 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
CD74-208ENST00000522246 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
CD74-208ENST00000522246 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms