RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 RASSF2P50749 326 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 PPP2R5DQ14738 602 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 BRDTQ58F21 947 aaPredicted RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 USP6P35125 1406 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 LRRC43Q8N309 656 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 FANCBQ8NB91 859 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 TRIM56Q9BRZ2 755 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 GPR108Q9NPR9 543 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 MRRFQ96E11 262 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 FLOT1O75955 427 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 MAGEA1P43355 309 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 MORC3Q14149 939 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 MTMR6Q9Y217 621 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 HNRNPCL1O60812 293 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 KCNJ12Q14500 433 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 SRLQ86TD4 932 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 XPO4Q9C0E2 1151 aaKnown RBP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 TNKSO95271 1327 aa13.24□□□□□ -0.29
ERGIC1-208ENST00000520399 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 APBA3O96018 575 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 CUL3Q13618 768 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 NR1I2O75469 434 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 BTDP43251 543 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 TPH2Q8IWU9 490 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 STAMQ92783 540 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 OTUD6AQ7L8S5 288 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 GPBP1Q86WP2 473 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 SYF2O95926 243 aaKnown RBP13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 DNM2P50570 870 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
ERGIC1-208ENST00000520399 FGAP02671 866 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 SCG2P13521 617 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 CMA1P23946 247 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 GREM2Q9H772 168 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 GAS7O60861 476 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 MAN1A1P33908 653 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 KCNG1Q9UIX4 513 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 HPDP32754 393 aaPredicted RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 TECP42680 631 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 ATG3Q9NT62 314 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 GOLGA8CPA6NN73 597 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 M0R2C6 588 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PCYT1AP49585 367 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 SCRN1Q12765 414 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 TRIML1Q8N9V2 468 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 RIOK1Q9BRS2 568 aaKnown RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PFDN6O15212 129 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 RRAGAQ7L523 313 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 ARHGAP18Q8N392 663 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PPP4R1Q8TF05 950 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 NOP53Q9NZM5 478 aaKnown RBP13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
ERGIC1-208ENST00000520399 TET3O43151 1660 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 HNRNPCP07910 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms