RNA–Protein interactions for RNA: ENST00000518944.1

CHCHD7-208, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, human

TSL 2

Gene CHCHD7, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHCHD7-208	ENST00000518944	TM9SF2	Q99805	663 aa		4.94	□□□□□ -1.62
CHCHD7-208	ENST00000518944	MINPP1	Q9UNW1	487 aa		4.94	□□□□□ -1.62
CHCHD7-208	ENST00000518944	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.94	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PCDHA5	Q9Y5H7	936 aa		4.94	□□□□□ -1.62
CHCHD7-208	ENST00000518944	EFEMP2	O95967	443 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ITGA4	P13612	1032 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	CTSK	P43235	329 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PMS1	P54277	932 aa	Known RBP	4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	CORO7	P57737	925 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	POU4F1	Q01851	419 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ANKRD39	Q53RE8	183 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	IGDCC3	Q8IVU1	814 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	TMEFF1	Q8IYR6	380 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	TAB3	Q8N5C8	712 aa	Predicted RBP	4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	TMEM87A	Q8NBN3	555 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	JMJD8	Q96S16	334 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PDLIM7	Q9NR12	457 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	USP40	Q9NVE5	1235 aa		4.93	□□□□□ -1.62
CHCHD7-208	ENST00000518944	FAM86C2P	A6NEL3	165 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	SRGAP3	O43295	1099 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	NCKAP1L	P55160	1127 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ZNF200	P98182	395 aa	Predicted RBP	4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	NFKB2	Q00653	900 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PLP2	Q04941	152 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ZNF428	Q96B54	188 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	CRBN	Q96SW2	442 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	SLC12A9	Q9BXP2	914 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	RNF38	Q9H0F5	515 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	NUDT5	Q9UKK9	219 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	PALD1	Q9ULE6	856 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ZNRF3	Q9ULT6	936 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944	FHOD1	Q9Y613	1164 aa		4.92	□□□□□ -1.62
CHCHD7-208	ENST00000518944		F8W031	263 aa	Predicted RBP	4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	NCAM1	P13591	858 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	L1CAM	P32004	1257 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ZNF76	P36508	570 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	KIR3DS1	Q14943	382 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	SPATS1	Q496A3	300 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	SLC12A7	Q9Y666	1083 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ADAMTS20	P59510	1910 aa		4.91	□□□□□ -1.62
CHCHD7-208	ENST00000518944	ADRB1	P08588	477 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	DBH	P09172	617 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	CD247	P20963	164 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	MVK	Q03426	396 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	MRPL58	Q14197	206 aa	Known RBP	4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	RTP2	Q5QGT7	225 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	TDRD10	Q5VZ19	366 aa	Known RBP	4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	FIBCD1	Q8N539	461 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	PTCHD1	Q96NR3	888 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SRRT	Q9BXP5	876 aa	Known RBP	4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	GBP3	Q9H0R5	595 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	GP6	Q9HCN6	339 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SUSD2	Q9UGT4	822 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	DIS3	Q9Y2L1	958 aa	Known RBP	4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	PMF1-BGLAP	U3KQ54	211 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944	IRS2	Q9Y4H2	1338 aa		4.9	□□□□□ -1.63
CHCHD7-208	ENST00000518944		A0A087WZG4	1122 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944		C9IYK1	514 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944		H0Y8X5	98 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	FGF10	O15520	208 aa	Predicted RBP	4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	TP53	P04637	393 aa	Predicted RBP	4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	CD3E	P07766	207 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	MSL3P1	P0C860	447 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	GUCY2C	P25092	1073 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	LIMS1	P48059	325 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	FOXO4	P98177	505 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	UBXN11	Q5T124	520 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	EEF1DP3	Q658K8	133 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SYT8	Q8NBV8	401 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	TMEM52	Q8NDY8	209 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	NLGN2	Q8NFZ4	835 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ALG3	Q92685	438 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	BRF1	Q92994	677 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SPATA32	Q96LK8	384 aa		4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	NOL6	Q9H6R4	1146 aa	Known RBP	4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	CNOT11	Q9UKZ1	510 aa	Known RBP	4.89	□□□□□ -1.63
CHCHD7-208	ENST00000518944	TRBV23OR9-2	A0A075B6M9	112 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SLURP1	P55000	103 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ZNF445	P59923	1031 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	PRR5	P85299	388 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	COL9A2	Q14055	689 aa	Predicted RBP	4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SLC9A5	Q14940	896 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	DCAF15	Q66K64	600 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ZDHHC15	Q96MV8	337 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	BDH2	Q9BUT1	245 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	METTL5	Q9NRN9	209 aa	Known RBP	4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	USP35	Q9P2H5	1018 aa		4.88	□□□□□ -1.63
CHCHD7-208	ENST00000518944	PPM1B	O75688	479 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ZBTB7A	O95365	584 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ACR	P10323	421 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	IGFBP6	P24592	240 aa	Predicted RBP	4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	TACR1	P25103	407 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	SEPHS1	P49903	392 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	HEATR6	Q6AI08	1181 aa	Known RBP	4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	UNC5A	Q6ZN44	842 aa		4.87	□□□□□ -1.63
CHCHD7-208	ENST00000518944	ADAT2	Q7Z6V5	191 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms