RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 MEIS2O14770 477 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 OPLAHO14841 1288 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FOXN1O15353 648 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 CCNT1O60563 726 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 ADCY5O95622 1261 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 BMP6P22004 513 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 CYP3A7P24462 503 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 EPS15P42566 896 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP11P51784 963 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 STAT2P52630 851 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 HIRAP54198 1017 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PNOCQ13519 176 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 POSTNQ15063 836 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 UBE2SQ16763 222 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 LETM2Q2VYF4 491 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 DPCR1Q3MIW9 517 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MCTP2Q6DN12 878 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PPP4R3AQ6IN85 833 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PDXDC2PQ6P474 469 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FAM160B2Q86V87 743 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FBXO11Q86XK2 927 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 APOBEC3FQ8IUX4 373 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 TRPM4Q8TD43 1214 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 CRYGNQ8WXF5 182 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PAGE5Q96GU1 130 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 AK8Q96MA6 479 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MBOAT7Q96N66 472 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PYM1Q9BRP8 204 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SYT17Q9BSW7 474 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 AMNQ9BXJ7 453 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 GLIS2Q9BZE0 524 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 NAT10Q9H0A0 1025 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 KIAA1683Q9H0B3 1180 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 RANBP17Q9H2T7 1088 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SH2D4AQ9H788 454 aa6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SCAF8Q9UPN6 1271 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PTPRFP10586 1907 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SRCAPQ6ZRS2 3230 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 IKBKBO14920 756 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SLC37A4O43826 429 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 RAD21O60216 631 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 NEMFO60524 1076 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 OR52Z1P0C646 297 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PRR29P0C7W0 189 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 GCFC2P16383 781 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 YBX3P16989 372 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FXR2P51116 673 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SNAP25P60880 206 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 DPYDQ12882 1025 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 TRAF1Q13077 416 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 AP3B2Q13367 1082 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MORC3Q14149 939 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PDIA5Q14554 519 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 NAALADL2Q58DX5 795 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FAM83BQ5T0W9 1011 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 DCAF15Q66K64 600 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 USP17L6PQ6QN14 398 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 SARM1Q6SZW1 724 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 CEP57L1Q8IYX8 460 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PDILTQ8N807 584 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 IGSF22Q8N9C0 903 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 TRIML1Q8N9V2 468 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 IQUBQ8NA54 791 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 LPAR1Q92633 364 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 DHX58Q96C10 678 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 HOOK2Q96ED9 719 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 P2RX7Q99572 595 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MTRQ99707 1265 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MMTAG2Q9BU76 263 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 WDR18Q9BV38 432 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 ZNF341Q9BYN7 854 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 FEM1BQ9UK73 627 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 MAN1B1Q9UKM7 699 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
SCARNA20.4-201ENST00000516969 PITPNM2Q9BZ72 1349 aa6.15□□□□□ -1.43
SCARNA20.4-201ENST00000516969 COL11A1P12107 1806 aaPredicted RBP6.15□□□□□ -1.43
SCARNA20.4-201ENST00000516969 BIN1O00499 593 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 WDR46O15213 610 aaKnown RBP6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 GTPBP6O43824 516 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 DDNO94850 711 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 SMC2O95347 1197 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 TDP2O95551 362 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 FOSP01100 380 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 CYP3A4P08684 503 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 CDC25AP30304 524 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 INPP5BP32019 993 aa6.14□□□□□ -1.43
SCARNA20.4-201ENST00000516969 CIITAP33076 1130 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms