RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 CPXCR1Q8N123 301 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 REXO1Q8N1G1 1221 aaKnown RBP28.47■■■□□ 2.15
TUSC3-213ENST00000515859 REPS2Q8NFH8 660 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 PNMA3Q9UL41 463 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 PCDHA6Q9UN73 950 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 PCDHA8Q9Y5H6 950 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 PARP14Q460N5 1801 aa28.47■■■□□ 2.15
TUSC3-213ENST00000515859 RLFQ13129 1914 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 GOLGA6L22H0YM25 854 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 RILPL1Q5EBL4 403 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 MCTP2Q6DN12 878 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 CCDC102AQ96A19 550 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 AGBL1Q96MI9 1066 aa28.46■■■□□ 2.15
TUSC3-213ENST00000515859 RAVER2Q9HCJ3 691 aaKnown RBP28.46■■■□□ 2.15
TUSC3-213ENST00000515859 ABT1Q9ULW3 272 aaKnown RBP28.46■■■□□ 2.15
TUSC3-213ENST00000515859 KRT25Q7Z3Z0 450 aa28.45■■■□□ 2.14
TUSC3-213ENST00000515859 ANKRD23Q86SG2 305 aa28.45■■■□□ 2.14
TUSC3-213ENST00000515859 BRI3BPQ8WY22 251 aa28.45■■■□□ 2.14
TUSC3-213ENST00000515859 P2RX7Q99572 595 aaKnown RBP28.45■■■□□ 2.14
TUSC3-213ENST00000515859 CCDC194A0A1B0GVG4 234 aa28.44■■■□□ 2.14
TUSC3-213ENST00000515859 SCAND2PQ9GZW5 306 aaPredicted RBP28.44■■■□□ 2.14
TUSC3-213ENST00000515859 TESPA1A2RU30 521 aaPredicted RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 SLC10A3P09131 477 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 NCLP19338 710 aaKnown RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 HERVK_113P62684 666 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 PIK3AP1Q6ZUJ8 805 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 ZNF214Q9UL59 606 aaPredicted RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 NOL7Q9UMY1 257 aaKnown RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 MANSC4A6NHS7 340 aaPredicted RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 PIK3CDO00329 1044 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 ADAMTS3O15072 1205 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 TRAPPC10P48553 1259 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 CLK2P49760 499 aaKnown RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 TMEM132BQ14DG7 1078 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 CSPP1Q1MSJ5 1256 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 GTF3C2Q8WUA4 911 aaPredicted RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 TEX13BQ9BXU2 312 aa28.43■■■□□ 2.14
TUSC3-213ENST00000515859 BIN2Q9UBW5 565 aaPredicted RBP28.43■■■□□ 2.14
TUSC3-213ENST00000515859 BTBD19C9JJ37 291 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 TKFCQ3LXA3 575 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 MCF2L2Q86YR7 1114 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 SAMD3Q8N6K7 520 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 RASGRP4Q8TDF6 673 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 CHAMP1Q96JM3 812 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 CNPY2Q9Y2B0 182 aa28.42■■■□□ 2.14
TUSC3-213ENST00000515859 OPLAHO14841 1288 aa28.41■■■□□ 2.14
TUSC3-213ENST00000515859 ALAS1P13196 640 aa28.41■■■□□ 2.14
TUSC3-213ENST00000515859 MCM4P33991 863 aa28.41■■■□□ 2.14
TUSC3-213ENST00000515859 POLR3EQ9NVU0 708 aa28.41■■■□□ 2.14
TUSC3-213ENST00000515859 TFIP11Q9UBB9 837 aaKnown RBP28.41■■■□□ 2.14
TUSC3-213ENST00000515859 PDHXO00330 501 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 MEIS2O14770 477 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 STAT3P40763 770 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 INHBEP58166 350 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 AP3B2Q13367 1082 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 NONOQ15233 471 aaKnown RBP eCLIP28.4■■■□□ 2.147e-8■■■■■ 28.3
TUSC3-213ENST00000515859 EARS2Q5JPH6 523 aaKnown RBP28.4■■■□□ 2.14
TUSC3-213ENST00000515859 SNRNP48Q6IEG0 339 aaKnown RBP28.4■■■□□ 2.14
TUSC3-213ENST00000515859 USP28Q96RU2 1077 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 MAP3K20Q9NYL2 800 aaKnown RBP28.4■■■□□ 2.14
TUSC3-213ENST00000515859 RTEL1Q9NZ71 1219 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 FOSP01100 380 aaPredicted RBP28.4■■■□□ 2.14
TUSC3-213ENST00000515859 TAL1P17542 331 aaPredicted RBP28.4■■■□□ 2.14
TUSC3-213ENST00000515859 JAKMIP3Q5VZ66 844 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 MAF1Q9H063 256 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 RABGAP1Q9Y3P9 1069 aa28.4■■■□□ 2.14
TUSC3-213ENST00000515859 DDX11L8A8MPP1 907 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 GCOM1H8Y6P7 765 aaPredicted RBP28.39■■■□□ 2.13
TUSC3-213ENST00000515859 POLR2MP0CAP2 368 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 TOB1P50616 345 aaPredicted RBP28.39■■■□□ 2.13
TUSC3-213ENST00000515859 NFKBIBQ15653 356 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 UBE2SQ16763 222 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 USP17L6PQ6QN14 398 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 CLEC4DQ8WXI8 215 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 TRERF1Q96PN7 1200 aa28.39■■■□□ 2.13
TUSC3-213ENST00000515859 ZCCHC17Q9NP64 241 aaKnown RBP28.39■■■□□ 2.13
TUSC3-213ENST00000515859 GHRHRQ02643 423 aa28.38■■■□□ 2.13
TUSC3-213ENST00000515859 ANO1Q5XXA6 986 aa28.38■■■□□ 2.13
TUSC3-213ENST00000515859 FAM205CA6NFA0 338 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 FAM155AB1AL88 458 aaPredicted RBP28.37■■■□□ 2.13
TUSC3-213ENST00000515859 FIBPO43427 364 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 YEATS4O95619 227 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 NASPP49321 788 aaPredicted RBP28.37■■■□□ 2.13
TUSC3-213ENST00000515859 PLS1Q14651 629 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 NOM1Q5C9Z4 860 aaKnown RBP28.37■■■□□ 2.13
TUSC3-213ENST00000515859 POTEEQ6S8J3 1075 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 TMEM87AQ8NBN3 555 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 TMEM260Q9NX78 707 aa28.37■■■□□ 2.13
TUSC3-213ENST00000515859 CFBP00751 764 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 APLP1P51693 650 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 FAM43AQ8N2R8 423 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 SPATA32Q96LK8 384 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 PTPN18Q99952 460 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 CREBZFQ9NS37 354 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 RNF146Q9NTX7 359 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 BTBD7Q9P203 1132 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 RCOR1Q9UKL0 485 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 RIPK3Q9Y572 518 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 MYH15Q9Y2K3 1946 aa28.36■■■□□ 2.13
TUSC3-213ENST00000515859 SPDYE3A6NKU9 549 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms