RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 A0A1W2PQD8 194 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 RBM25P49756 843 aaKnown RBP8.51□□□□□ -1.05
PDE4D-221ENST00000514231 SRSF3P84103 164 aaKnown RBP8.51□□□□□ -1.05
PDE4D-221ENST00000514231 MVKQ03426 396 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 GRB10Q13322 594 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 NCAPHQ15003 741 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 TNNI3KQ59H18 835 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 EEF1DP3Q658K8 133 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 ZNF513Q8N8E2 541 aaPredicted RBP8.51□□□□□ -1.05
PDE4D-221ENST00000514231 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 CGGBP1Q9UFW8 167 aaPredicted RBP8.51□□□□□ -1.05
PDE4D-221ENST00000514231 SUGT1Q9Y2Z0 365 aa8.51□□□□□ -1.05
PDE4D-221ENST00000514231 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 VAMP4O75379 141 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 SDHBP21912 280 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 TMEM62Q0P6H9 643 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-221ENST00000514231 OLFML2BQ68BL8 750 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 MCMBPQ9BTE3 642 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 SIRT5Q9NXA8 310 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 MRVI1Q9Y6F6 885 aa8.5□□□□□ -1.05
PDE4D-221ENST00000514231 SMAD7O15105 426 aaKnown RBP8.49□□□□□ -1.05
PDE4D-221ENST00000514231 NAT2P11245 290 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 VIPR1P32241 457 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 CORO7P57737 925 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 AMPD2Q01433 879 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 SIAH1Q8IUQ4 282 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 LRRC56Q8IYG6 542 aaPredicted RBP8.49□□□□□ -1.05
PDE4D-221ENST00000514231 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE4D-221ENST00000514231 TINF2Q9BSI4 451 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 TNFRSF12AQ9NP84 129 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 KLHL14Q9P2G3 628 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 MBD1Q9UIS9 605 aaPredicted RBP8.49□□□□□ -1.05
PDE4D-221ENST00000514231 AKT3Q9Y243 479 aa8.49□□□□□ -1.05
PDE4D-221ENST00000514231 C2orf71A6NGG8 1288 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 L1CAMP32004 1257 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 ARID5AQ03989 594 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 BVESQ8NE79 360 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 SGPP1Q9BX95 441 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 ACTR10Q9NZ32 417 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 EMC9Q9Y3B6 208 aa8.48□□□□□ -1.05
PDE4D-221ENST00000514231 MSL3P1P0C860 447 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 ETFBP38117 255 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 LINC00310P59036 64 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 RAB3GAP1Q15042 981 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 DPY19L1Q2PZI1 675 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 POMZP3Q6PJE2 187 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-221ENST00000514231 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 IGSF5Q9NSI5 407 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 BACE2Q9Y5Z0 518 aa8.47□□□□□ -1.05
PDE4D-221ENST00000514231 FGRP09769 529 aa8.46□□□□□ -1.06
PDE4D-221ENST00000514231 SEPHS1P49903 392 aa8.46□□□□□ -1.06
PDE4D-221ENST00000514231 NR1I3Q14994 352 aa8.46□□□□□ -1.06
PDE4D-221ENST00000514231 CIAPIN1Q6FI81 312 aa8.46□□□□□ -1.06
PDE4D-221ENST00000514231 CNTD2Q9H8S5 307 aa8.46□□□□□ -1.06
PDE4D-221ENST00000514231 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
PDE4D-221ENST00000514231 E9PSI1 815 aa8.45□□□□□ -1.06
PDE4D-221ENST00000514231 STXBP3O00186 592 aa8.45□□□□□ -1.06
PDE4D-221ENST00000514231 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
PDE4D-221ENST00000514231 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
PDE4D-221ENST00000514231 GMLQ99445 158 aa8.45□□□□□ -1.06
PDE4D-221ENST00000514231 A0A1W2PQJ5 194 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 NUDT19A8MXV4 375 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 N4BP3O15049 544 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 FXNQ16595 210 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 FBLN7Q53RD9 439 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 PAQR3Q6TCH7 311 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 C6orf15Q6UXA7 325 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-221ENST00000514231 RPTNQ6XPR3 784 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 SPOCD1Q6ZMY3 1216 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
PDE4D-221ENST00000514231 CNOT6Q9ULM6 557 aaKnown RBP8.44□□□□□ -1.06
PDE4D-221ENST00000514231 KCNH1O95259 989 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 CYBBP04839 570 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 ZSCAN22P10073 491 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-221ENST00000514231 PAMP19021 973 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 MAPKAPK2P49137 400 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
PDE4D-221ENST00000514231 ZNF385BQ569K4 471 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 MCF2L2Q86YR7 1114 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 COPS5Q92905 334 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 SIGLEC10Q96LC7 697 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 ZNF408Q9H9D4 720 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
PDE4D-221ENST00000514231 NPHP3-ACAD11A0A0J9YXS1 232 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 NUAK1O60285 661 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 DBHP09172 617 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
PDE4D-221ENST00000514231 BICRALQ6AI39 1079 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 TMC6Q7Z403 805 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
PDE4D-221ENST00000514231 TRIM59Q8IWR1 403 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms