RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 NAPBQ9H115 298 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 ACAD9Q9H845 621 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 CXXC1Q9P0U4 656 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-202ENST00000509637 PLA2G6O60733 806 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 ALAS1P13196 640 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 STAT2P52630 851 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 TNFAIP2Q03169 654 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 PCSK9Q8NBP7 692 aaKnown RBP18.91■□□□□ 0.62
RAB40C-202ENST00000509637 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 PBX4Q9BYU1 374 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 ZNF576Q9H609 170 aa18.91■□□□□ 0.62
RAB40C-202ENST00000509637 CTDP1Q9Y5B0 961 aaPredicted RBP18.91■□□□□ 0.62
RAB40C-202ENST00000509637 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
RAB40C-202ENST00000509637 FGRP09769 529 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 SLC16A2P36021 539 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 SLC1A4P43007 532 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 PDE4BQ07343 736 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 CYP39A1Q9NYL5 469 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 MTMR7Q9Y216 660 aa18.9■□□□□ 0.62
RAB40C-202ENST00000509637 TMEM265A0A087WTH1 108 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 DYNC1LI2O43237 492 aaPredicted RBP18.89■□□□□ 0.61
RAB40C-202ENST00000509637 MX1P20591 662 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 PSMC6P62333 389 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 ADGRE1Q14246 886 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
RAB40C-202ENST00000509637 MORC4Q8TE76 937 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 CHURC1Q8WUH1 139 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 TRPV6Q9H1D0 765 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 ZNF287Q9HBT7 754 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 ANAPC4Q9UJX5 808 aa18.89■□□□□ 0.61
RAB40C-202ENST00000509637 SPTBN5Q9NRC6 3674 aaKnown RBP18.88■□□□□ 0.61
RAB40C-202ENST00000509637 FDX1P10109 184 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 TLK2Q86UE8 772 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 PPP1R13LQ8WUF5 828 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 TIFAQ96CG3 184 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
RAB40C-202ENST00000509637 STX8Q9UNK0 236 aa18.88■□□□□ 0.61
RAB40C-202ENST00000509637 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
RAB40C-202ENST00000509637 NFIBO00712 420 aa18.87■□□□□ 0.61
RAB40C-202ENST00000509637 ERC2O15083 957 aa18.87■□□□□ 0.61
RAB40C-202ENST00000509637 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.61
RAB40C-202ENST00000509637 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
RAB40C-202ENST00000509637 TKFCQ3LXA3 575 aa18.87■□□□□ 0.61
RAB40C-202ENST00000509637 YBX2Q9Y2T7 364 aaKnown RBP18.87■□□□□ 0.61
RAB40C-202ENST00000509637 GBF1Q92538 1859 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 CHD9Q3L8U1 2897 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 A0A0D9SFI3 127 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 ORC4O43929 436 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 B4GALT4O60513 344 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 FGAP02671 866 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 IKQ13123 557 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 BAATQ14032 418 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 ALX1Q15699 326 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 FSCN1Q16658 493 aaKnown RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 BTNL9Q6UXG8 535 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 NSMFQ6X4W1 530 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 ZNF589Q86UQ0 364 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 CLEC4DQ8WXI8 215 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 NOC4LQ9BVI4 516 aaKnown RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 RANBP17Q9H2T7 1088 aaKnown RBP18.86■□□□□ 0.61
RAB40C-202ENST00000509637 PRDM12Q9H4Q4 367 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 IL23AQ9NPF7 189 aa18.86■□□□□ 0.61
RAB40C-202ENST00000509637 MROH7Q68CQ1 1323 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 ASB14A6NK59 587 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
RAB40C-202ENST00000509637 CCL23P55773 120 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 IQSEC1Q6DN90 963 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 NOL8Q76FK4 1167 aaKnown RBP18.85■□□□□ 0.61
RAB40C-202ENST00000509637 HERVK_113Q902F9 699 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 SPC25Q9HBM1 224 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
RAB40C-202ENST00000509637 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-202ENST00000509637 ICAM1P05362 532 aa18.84■□□□□ 0.61
RAB40C-202ENST00000509637 PDE1AP54750 535 aa18.84■□□□□ 0.61
RAB40C-202ENST00000509637 ANKRD45Q5TZF3 282 aa18.84■□□□□ 0.61
RAB40C-202ENST00000509637 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
RAB40C-202ENST00000509637 GPCPD1Q9NPB8 672 aa18.84■□□□□ 0.61
RAB40C-202ENST00000509637 SLC3A2P08195 630 aaKnown RBP18.83■□□□□ 0.6
RAB40C-202ENST00000509637 MYOGP15173 224 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 SLC30A10Q6XR72 485 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 SCLYQ96I15 445 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 CRBNQ96SW2 442 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 NKX2-4Q9H2Z4 354 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 HIPK3Q9H422 1215 aa18.83■□□□□ 0.6
RAB40C-202ENST00000509637 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
RAB40C-202ENST00000509637 ALDH5A1P51649 535 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-202ENST00000509637 RABGGTBP53611 331 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 HAND2P61296 217 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 CCDC96Q2M329 555 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 LRRFIP1Q32MZ4 808 aaKnown RBP18.82■□□□□ 0.6
RAB40C-202ENST00000509637 SYDE2Q5VT97 1194 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms