RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 FGD4Q96M96 766 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 FBXO40Q9UH90 709 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 ATP2A1O14983 1001 aa16.49■□□□□ 0.23
HMGCR-208ENST00000509431 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
HMGCR-208ENST00000509431 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
HMGCR-208ENST00000509431 NCK2O43639 380 aa16.49■□□□□ 0.23
HMGCR-208ENST00000509431 SMAD2Q15796 467 aaKnown RBP16.49■□□□□ 0.23
HMGCR-208ENST00000509431 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
HMGCR-208ENST00000509431 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
HMGCR-208ENST00000509431 ZNF512BQ96KM6 892 aaPredicted RBP16.49■□□□□ 0.23
HMGCR-208ENST00000509431 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
HMGCR-208ENST00000509431 GJB5O95377 273 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 MTX1Q13505 466 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
HMGCR-208ENST00000509431 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 TRIOO75962 3097 aa16.48■□□□□ 0.23
HMGCR-208ENST00000509431 ASB14A6NK59 587 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 ZAP70P43403 619 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 NUBP1P53384 320 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 EP400NLQ6ZTU2 488 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 BANK1Q8NDB2 785 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 CHST13Q8NET6 341 aa16.47■□□□□ 0.23
HMGCR-208ENST00000509431 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
HMGCR-208ENST00000509431 EFCAB14O75071 495 aa16.46■□□□□ 0.23
HMGCR-208ENST00000509431 IDH1O75874 414 aaKnown RBP16.46■□□□□ 0.23
HMGCR-208ENST00000509431 SMPD1P17405 629 aa16.46■□□□□ 0.23
HMGCR-208ENST00000509431 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
HMGCR-208ENST00000509431 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
HMGCR-208ENST00000509431 MCM9Q9NXL9 1143 aa16.46■□□□□ 0.23
HMGCR-208ENST00000509431 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
HMGCR-208ENST00000509431 TRIP12Q14669 1992 aaPredicted RBP16.46■□□□□ 0.22
HMGCR-208ENST00000509431 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.22
HMGCR-208ENST00000509431 PARNO95453 639 aaKnown RBP16.45■□□□□ 0.22
HMGCR-208ENST00000509431 AKR1B1P15121 316 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGCR-208ENST00000509431 CCDC155Q8N6L0 562 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
HMGCR-208ENST00000509431 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 SAMD11Q96NU1 681 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 NSUN3Q9H649 340 aaKnown RBP16.45■□□□□ 0.22
HMGCR-208ENST00000509431 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
HMGCR-208ENST00000509431 ABHD14A-ACY1A0A1B0GW23 586 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 ZBED4O75132 1171 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 EEF2P13639 858 aaKnown RBP16.44■□□□□ 0.22
HMGCR-208ENST00000509431 DEFB103AP81534 67 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 PTPN11Q06124 597 aaPredicted RBP16.44■□□□□ 0.22
HMGCR-208ENST00000509431 NBPF20Q3BBV1 942 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 NFRKBQ6P4R8 1299 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 CNKSR3Q6P9H4 555 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 ASCL5Q7RTU5 278 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
HMGCR-208ENST00000509431 CRNKL1Q9BZJ0 848 aaKnown RBP16.44■□□□□ 0.22
HMGCR-208ENST00000509431 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
HMGCR-208ENST00000509431 PRR23AA6NEV1 266 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 RGS20O76081 388 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 ZXDAP98168 799 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 TMCO2Q7Z6W1 182 aaPredicted RBP16.43■□□□□ 0.22
HMGCR-208ENST00000509431 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 FAM133AQ8N9E0 248 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 MTG1Q9BT17 334 aaPredicted RBP16.43■□□□□ 0.22
HMGCR-208ENST00000509431 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 GPHNQ9NQX3 736 aaPredicted RBP16.43■□□□□ 0.22
HMGCR-208ENST00000509431 INSL6Q9Y581 213 aa16.43■□□□□ 0.22
HMGCR-208ENST00000509431 DCHS1Q96JQ0 3298 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 USP17L21D6R901 530 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 STXBP3O00186 592 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 MBTPS2O43462 519 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 RAD21O60216 631 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 AVPR2P30518 371 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 CPT1AP50416 773 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 OAZ1P54368 228 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
HMGCR-208ENST00000509431 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
HMGCR-208ENST00000509431 FAM47CQ5HY64 1035 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 MEIS3Q99687 375 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 C17orf80Q9BSJ5 609 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 CACNA1GO43497 2377 aa16.42■□□□□ 0.22
HMGCR-208ENST00000509431 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 KRT37O76014 449 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 GNAI3P08754 354 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 CNTN2Q02246 1040 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms