RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 COPB1P53618 953 aaKnown RBP12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 SP8Q8IXZ3 490 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 H7C1D1 291 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 ERVK-24P63145 666 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 UBXN1Q04323 297 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
SEC31A-228ENST00000509142 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 MAST2Q6P0Q8 1798 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 MYH8P13535 1937 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 M0R2N6 131 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TXKP42681 527 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 ASIC1P78348 528 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
SEC31A-228ENST00000509142 TMCO3Q6UWJ1 677 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
SEC31A-228ENST00000509142 GAKO14976 1311 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 PRPHP41219 470 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 TCP11X2Q5H9J9 407 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 AK8Q96MA6 479 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 FUT8Q9BYC5 575 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 MFAP3LO75121 409 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 PLCG1P19174 1290 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 CYP2C19P33261 490 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 AMPD3Q01432 767 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 COA7Q96BR5 231 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 ANKZF1Q9H8Y5 726 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 LIMA1Q9UHB6 759 aaKnown RBP12.3□□□□□ -0.44
SEC31A-228ENST00000509142 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
SEC31A-228ENST00000509142 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 AKR1B1P15121 316 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 PDE4DQ08499 809 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
SEC31A-228ENST00000509142 KIF5CO60282 957 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
SEC31A-228ENST00000509142 MYL1P05976 194 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 PDHBP11177 359 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ADCY7P51828 1080 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 TMEM266Q2M3C6 531 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 LRRC15Q8TF66 581 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ATP6V0A2Q9Y487 856 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 FECHP22830 423 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 SMARCA1P28370 1054 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 GYS2P54840 703 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 NAALADL2Q58DX5 795 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
SEC31A-228ENST00000509142 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
SEC31A-228ENST00000509142 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 TNNI2P48788 182 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 RBM5P52756 815 aaKnown RBP eCLIP12.29□□□□□ -0.44
SEC31A-228ENST00000509142 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ADSSL1Q8N142 457 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.447e-8■□□□□ 9.4
SEC31A-228ENST00000509142 PNKPQ96T60 521 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 CUEDC2Q9H467 287 aa12.29□□□□□ -0.44
SEC31A-228ENST00000509142 TTLL1O95922 423 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 HSPA1LP34931 641 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 KRT9P35527 623 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 ARHGAP25P42331 645 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 CALCRLQ16602 461 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 TRIM34Q9BYJ4 488 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 RAB34Q9BZG1 259 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 SUGCTQ9HAC7 445 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
SEC31A-228ENST00000509142 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
SEC31A-228ENST00000509142 H3BQF6 201 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 KCNB1Q14721 858 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
SEC31A-228ENST00000509142 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 LRWD1Q9UFC0 647 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
SEC31A-228ENST00000509142 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 PMS1P54277 932 aaKnown RBP12.28□□□□□ -0.44
SEC31A-228ENST00000509142 TRIM14Q14142 442 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 CSGALNACT2Q8N6G5 542 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 MAGEF1Q9HAY2 307 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
SEC31A-228ENST00000509142 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms