RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 TICAM2Q86XR7 235 aa21.17■□□□□ 0.98
SKP2-204ENST00000508514 DCAF4Q8WV16 495 aa21.17■□□□□ 0.98
SKP2-204ENST00000508514 RANBP17Q9H2T7 1088 aaKnown RBP21.17■□□□□ 0.98
SKP2-204ENST00000508514 CDH23Q9H251 3354 aa21.17■□□□□ 0.98
SKP2-204ENST00000508514 FRMPD2Q68DX3 1309 aaPredicted RBP21.16■□□□□ 0.98
SKP2-204ENST00000508514 ICAM1P05362 532 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 RAG1P15918 1043 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 B4GALNT3Q6L9W6 998 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 TAPT1Q6NXT6 567 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 TBC1D10CQ8IV04 446 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 PLEKHM2Q8IWE5 1019 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 PCSK9Q8NBP7 692 aaKnown RBP21.16■□□□□ 0.98
SKP2-204ENST00000508514 GLT1D1Q96MS3 346 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 TTYH1Q9H313 450 aaPredicted RBP21.16■□□□□ 0.98
SKP2-204ENST00000508514 SEMA6BQ9H3T3 888 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 CCPG1Q9ULG6 757 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 UNC80Q8N2C7 3258 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 EYSQ5T1H1 3165 aa21.16■□□□□ 0.98
SKP2-204ENST00000508514 ZMYM6O95789 1325 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 CCDC171Q6TFL3 1326 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 DCDC2CA8MYV0 355 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 DLL1O00548 723 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 TOP1P11387 765 aaKnown RBP21.15■□□□□ 0.98
SKP2-204ENST00000508514 SMPD1P17405 629 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 SMAD3P84022 425 aaKnown RBP21.15■□□□□ 0.98
SKP2-204ENST00000508514 TNFAIP2Q03169 654 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 CCDC96Q2M329 555 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 C16orf59Q7L2K0 433 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 GPCPD1Q9NPB8 672 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 TOMM22Q9NS69 142 aa21.15■□□□□ 0.98
SKP2-204ENST00000508514 LCTP09848 1927 aa21.14■□□□□ 0.98
SKP2-204ENST00000508514 GRIN2DO15399 1336 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 ASB14A6NK59 587 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 ARVCFO00192 962 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 TIMP1P01033 207 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 SDSP20132 328 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 FPGSQ05932 587 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 SYDE2Q5VT97 1194 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 EEPD1Q7L9B9 569 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 FAM126BQ8IXS8 530 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 MORC4Q8TE76 937 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 RILPL2Q969X0 211 aa21.14■□□□□ 0.97
SKP2-204ENST00000508514 CDX2Q99626 313 aaPredicted RBP21.14■□□□□ 0.97
SKP2-204ENST00000508514 NFIBO00712 420 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 PDHBP11177 359 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 NUCB1Q02818 461 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 BAATQ14032 418 aaPredicted RBP21.13■□□□□ 0.97
SKP2-204ENST00000508514 AKNAD1Q5T1N1 836 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 ZNF697Q5TEC3 545 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 CXCL17Q6UXB2 119 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 NSMFQ6X4W1 530 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 CHD1LQ86WJ1 897 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 FBXO16Q8IX29 292 aaPredicted RBP21.13■□□□□ 0.97
SKP2-204ENST00000508514 SLC43A3Q8NBI5 491 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 OSBPL3Q9H4L5 887 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 SPC25Q9HBM1 224 aa21.13■□□□□ 0.97
SKP2-204ENST00000508514 A0A0U1RQG5 324 aaPredicted RBP21.12■□□□□ 0.97
SKP2-204ENST00000508514 CD4P01730 458 aa21.12■□□□□ 0.97
SKP2-204ENST00000508514 SNHG28P0DPA3 235 aa21.12■□□□□ 0.97
SKP2-204ENST00000508514 EXOC6Q8TAG9 804 aa21.12■□□□□ 0.97
SKP2-204ENST00000508514 VTI1AQ96AJ9 217 aa21.12■□□□□ 0.97
SKP2-204ENST00000508514 RNPC3Q96LT9 517 aaKnown RBP21.12■□□□□ 0.97
SKP2-204ENST00000508514 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
SKP2-204ENST00000508514 LRRC37A2A6NM11 1700 aa21.12■□□□□ 0.97
SKP2-204ENST00000508514 NEDD4P46934 1319 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 DYNC1LI2O43237 492 aaPredicted RBP21.11■□□□□ 0.97
SKP2-204ENST00000508514 ZNF543Q08ER8 600 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 AAMPQ13685 434 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 MFSD5Q6N075 450 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
SKP2-204ENST00000508514 TLK2Q86UE8 772 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 TTC14Q96N46 770 aa21.11■□□□□ 0.97
SKP2-204ENST00000508514 RWDD1Q9H446 243 aaPredicted RBP21.11■□□□□ 0.97
SKP2-204ENST00000508514 FSCN1Q16658 493 aaKnown RBP21.1■□□□□ 0.97
SKP2-204ENST00000508514 IQSEC1Q6DN90 963 aa21.1■□□□□ 0.97
SKP2-204ENST00000508514 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
SKP2-204ENST00000508514 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.1■□□□□ 0.972e-6■■■■□ 19.8
SKP2-204ENST00000508514 ZKSCAN3Q9BRR0 538 aa21.1■□□□□ 0.97
SKP2-204ENST00000508514 MROH7Q68CQ1 1323 aa21.09■□□□□ 0.97
SKP2-204ENST00000508514 CSF2RAP15509 400 aa21.09■□□□□ 0.97
SKP2-204ENST00000508514 SLC30A10Q6XR72 485 aa21.09■□□□□ 0.97
SKP2-204ENST00000508514 CPVLQ9H3G5 476 aa21.09■□□□□ 0.97
SKP2-204ENST00000508514 PCP11498 1178 aaKnown RBP21.08■□□□□ 0.97
SKP2-204ENST00000508514 ALDH5A1P51649 535 aaPredicted RBP21.08■□□□□ 0.97
SKP2-204ENST00000508514 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
SKP2-204ENST00000508514 RASIP1Q5U651 963 aa21.08■□□□□ 0.97
SKP2-204ENST00000508514 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
SKP2-204ENST00000508514 VTA1Q9NP79 307 aa21.08■□□□□ 0.97
SKP2-204ENST00000508514 Q9Y3F1 56 aa21.08■□□□□ 0.97
SKP2-204ENST00000508514 PRUNE2Q8WUY3 3088 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 GOLGA8HP0CJ92 632 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 CYP2C18P33260 490 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 PSMC6P62333 389 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 ITGA7Q13683 1181 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 KIAA1211Q6ZU35 1233 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 MYLIPQ8WY64 445 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 PPP1R12CQ9BZL4 782 aa21.07■□□□□ 0.96
SKP2-204ENST00000508514 AP5M1Q9H0R1 490 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms