RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ZNF214Q9UL59 606 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CTDP1Q9Y5B0 961 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 GPR25O00155 361 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 CPLX1O14810 134 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 ADAMTS3O15072 1205 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 PLA2G6O60733 806 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 STAT3P40763 770 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 MUM1L1Q5H9M0 696 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 NCAPG2Q86XI2 1143 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 GPRC5AQ8NFJ5 357 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 SHISA4Q96DD7 197 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 SPATC1LQ9H0A9 340 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 RBM28Q9NW13 759 aaKnown RBP10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
SCAMP1-202ENST00000506858 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 ERCC3P19447 782 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 GCLCP48506 637 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 GNAQP50148 359 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 PKN1Q16512 942 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 NSUN7Q8NE18 718 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 CD99L2Q8TCZ2 262 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 MTMR8Q96EF0 704 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 ZCCHC17Q9NP64 241 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-202ENST00000506858 CENPFP49454 3210 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 NFIBO00712 420 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 FDPSP14324 419 aaKnown RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 IFNAR1P17181 557 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 LBX1P52954 281 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 FBXO11Q86XK2 927 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 RRP36Q96EU6 259 aaKnown RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 ZSCAN31Q96LW9 406 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 MORF4L1Q9UBU8 362 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 COL11A1P12107 1806 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 THSD7BQ9C0I4 1608 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 ZSWIM8A7E2V4 1837 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 PARP14Q460N5 1801 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 DOCK3Q8IZD9 2030 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 PTPDC1A2A3K4 754 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 ZBTB5O15062 677 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 ICAM1P05362 532 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 HSPA8P11142 646 aaKnown RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 PSMC4P43686 418 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 RCAN1P53805 252 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 SP3Q02447 781 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 FAM110CQ1W6H9 321 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 WWC2Q6AWC2 1192 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 CLEC4DQ8WXI8 215 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 LZTS2Q9BRK4 669 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 TEX13BQ9BXU2 312 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 RNF146Q9NTX7 359 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 ORC3Q9UBD5 711 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 PCDHA1Q9Y5I3 950 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
SCAMP1-202ENST00000506858 NID2Q14112 1375 aa10.21□□□□□ -0.77
SCAMP1-202ENST00000506858 CASP8AP2Q9UKL3 1982 aa10.21□□□□□ -0.77
SCAMP1-202ENST00000506858 HTTP42858 3142 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 OPLAHO14841 1288 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 PRPF3O43395 683 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 FMNL1O95466 1100 aaPredicted RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 PGK2P07205 417 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 LACTBP83111 547 aaPredicted RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 GUCY1B3Q02153 619 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 RIOX2Q8IUF8 465 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 CCAR1Q8IX12 1150 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 MB21D1Q8N884 522 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 SNX21Q969T3 373 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 GABRQQ9UN88 632 aa10.21□□□□□ -0.78
SCAMP1-202ENST00000506858 K7ELQ4 463 aaPredicted RBP10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 FKTNO75072 461 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 HOXA13P31271 388 aaPredicted RBP10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 NSMFQ6X4W1 530 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 HSCBQ8IWL3 235 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 AMNQ9BXJ7 453 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 CFHR5Q9BXR6 569 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 SAGE1Q9NXZ1 904 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 SEC63Q9UGP8 760 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 KCNJ14Q9UNX9 436 aa10.2□□□□□ -0.78
SCAMP1-202ENST00000506858 STXBP3O00186 592 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms