RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 DDX4Q9NQI0 724 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 HMG20BQ9P0W2 317 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 SUGT1Q9Y2Z0 365 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 MAST3O60307 1309 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 COL8A1P27658 744 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ADH6P28332 368 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ARID4AP29374 1257 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 IREB2P48200 963 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 DGKGP49619 791 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 SREBF2Q12772 1141 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 CRHR2Q13324 411 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 FAM83AQ86UY5 434 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ALYREFQ86V81 257 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 FTSJ3Q8IY81 847 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 BRI3BPQ8WY22 251 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 DBNDD2Q9BQY9 259 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ABCF2Q9UG63 623 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 RBBP6Q7Z6E9 1792 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 DNAH12Q6ZR08 3092 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 SZT2Q5T011 3432 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 PDS5AQ29RF7 1337 aaKnown RBP5.98□□□□□ -1.45
CDH9-203ENST00000505045 LOC285556D6RIA3 1793 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MANSC4A6NHS7 340 aaPredicted RBP5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L15C9J2P7 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L10C9JJH3 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L13C9JLJ4 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L12C9JPN9 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L11C9JVI0 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L21D6R901 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L18D6R9N7 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L22D6RA61 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L17D6RBQ6 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L19D6RCP7 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L20D6RJB6 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 WDHD1O75717 1129 aaPredicted RBP5.98□□□□□ -1.45
CDH9-203ENST00000505045 RGS3P49796 1198 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 SOX10P56693 466 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 RHBDL3P58872 404 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MECOMQ03112 1051 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 USP17L24Q0WX57 530 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 SFSWAPQ12872 951 aaKnown RBP5.98□□□□□ -1.45
CDH9-203ENST00000505045 DPYDQ12882 1025 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 FZD5Q13467 585 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 TNNI3KQ59H18 835 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 FKBP1CQ5VVH2 108 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 CEP85Q6P2H3 762 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 ADGRA1Q86SQ6 560 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 FAM43AQ8N2R8 423 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 NEUROD6Q96NK8 337 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MRIQ9BWK5 157 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 DBNLQ9UJU6 430 aaKnown RBP5.98□□□□□ -1.45
CDH9-203ENST00000505045 FPGT-TNNI3KV9GXZ4 949 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MROH7-TTC4A0A0A0MT08 1334 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MGAMO43451 1857 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 NAV1Q8NEY1 1877 aa5.98□□□□□ -1.45
CDH9-203ENST00000505045 MYH1P12882 1939 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 MYH7P12883 1935 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 DDTLA6NHG4 134 aaPredicted RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 BTDP43251 543 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 TNNI2P48788 182 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 MVPQ14764 893 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 C20orf194Q5TEA3 1177 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 CTU1Q7Z7A3 348 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 CCDC84Q86UT8 332 aaPredicted RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 DZIP1Q86YF9 867 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 ANKMY2Q8IV38 441 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SPATA5Q8NB90 893 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 ZNF280CQ8ND82 737 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 NSUN4Q96CB9 384 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 HSH2DQ96JZ2 352 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SUSD3Q96L08 255 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SLC30A3Q99726 388 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 VRTNQ9H8Y1 702 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 USP40Q9NVE5 1235 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 GNL3LQ9NVN8 582 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 TMOD2Q9NZR1 351 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 EXOC6BQ9Y2D4 811 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 CEP290O15078 2479 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 CCL15-CCL14A0A0B4J2E2 113 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SURF6O75683 361 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 PCBP4P57723 403 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 ATP8B2P98198 1209 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 PICALMQ13492 652 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 MOGSQ13724 837 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 CCL15Q16663 113 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 CHSY3Q70JA7 882 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SIRT2Q8IXJ6 389 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 ALDH16A1Q8IZ83 802 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 FAM151AQ8WW52 585 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 SCG3Q8WXD2 468 aaKnown RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
CDH9-203ENST00000505045 SUV39H2Q9H5I1 410 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 HDAC5Q9UQL6 1122 aa5.97□□□□□ -1.45
CDH9-203ENST00000505045 AKAP2Q9Y2D5 859 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms