RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 BRAPQ7Z569 592 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 UBE2Q1Q7Z7E8 422 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
TPM3-218ENST00000505010 ADGRF4Q8IZF3 695 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 RAET1EQ8TD07 263 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 KIAA1683Q9H0B3 1180 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 ZCCHC17Q9NP64 241 aaKnown RBP10.75□□□□□ -0.69
TPM3-218ENST00000505010 BIN2Q9UBW5 565 aaPredicted RBP10.75□□□□□ -0.69
TPM3-218ENST00000505010 COL11A1P12107 1806 aaPredicted RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 TRIM75PA6NK02 468 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 STXBP3O00186 592 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 WDR46O15213 610 aaKnown RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 CETPP11597 493 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 CCL5P13501 91 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 GRK4P32298 578 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 STAT2P52630 851 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 USP14P54578 494 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 KRT85P78386 507 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 SPP2Q13103 211 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 CDC37Q16543 378 aaPredicted RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 ZNF280CQ8ND82 737 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 CCDC12Q8WUD4 166 aaPredicted RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 TRIM47Q96LD4 638 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 ZNF396Q96N95 335 aaPredicted RBP10.74□□□□□ -0.69
TPM3-218ENST00000505010 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 SH3GLB2Q9NR46 395 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 BARHL2Q9NY43 387 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 SRRDQ9UH36 339 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 ZHX2Q9Y6X8 837 aa10.74□□□□□ -0.69
TPM3-218ENST00000505010 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 BTBD19C9JJ37 291 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 hCG_1984214I3L0E3 225 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 ZBTB5O15062 677 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 PTMSP20962 102 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 CALML3P27482 149 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 PSMC4P43686 418 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 UBXN2AP68543 259 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 NR5A1Q13285 461 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 NOSTRINQ8IVI9 506 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 ZNF713Q8N859 430 aaPredicted RBP10.73□□□□□ -0.69
TPM3-218ENST00000505010 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 LPAR1Q92633 364 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 TANGO6Q9C0B7 1094 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 FOXP1Q9H334 677 aaPredicted RBP10.73□□□□□ -0.69
TPM3-218ENST00000505010 VCANP13611 3396 aa10.73□□□□□ -0.69
TPM3-218ENST00000505010 RLFQ13129 1914 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 PPP1R11O60927 126 aaPredicted RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 FARP2O94887 1054 aaPredicted RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 VCAM1P19320 739 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 OSBPP22059 807 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 U2AF2P26368 475 aaKnown RBP eCLIP10.72□□□□□ -0.692e-17■■■■□ 20.5
TPM3-218ENST00000505010 BACE1P56817 501 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 SNAP25P60880 206 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 CEBPZQ03701 1054 aaKnown RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 C17orf99Q6UX52 265 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 BTNL9Q6UXG8 535 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 DEFB123Q8N688 67 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 CHURC1Q8WUH1 139 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 COA7Q96BR5 231 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 MTMR8Q96EF0 704 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 TMOD4Q9NZQ9 345 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
TPM3-218ENST00000505010 FEM1BQ9UK73 627 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 PCDHA4Q9UN74 947 aa10.72□□□□□ -0.69
TPM3-218ENST00000505010 A0A0G2JMZ2 1700 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 SPDYE5A6NIY4 337 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 IRF6O14896 467 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 ADCY7P51828 1080 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 HMGCS2P54868 508 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 NPY5RQ15761 445 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 TPRNQ4KMQ1 711 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 GALNT17Q6IS24 598 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 CCDC174Q6PII3 467 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 ERO1BQ86YB8 467 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 FAM177A1Q8N128 213 aaPredicted RBP10.71□□□□□ -0.69
TPM3-218ENST00000505010 TMEM87AQ8NBN3 555 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 DAGLBQ8NCG7 672 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 SPATA32Q96LK8 384 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms