RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 VWCEQ96DN2 955 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 HAUS7Q99871 368 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 HOMER2Q9NSB8 354 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 FEM1BQ9UK73 627 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 GNEQ9Y223 722 aaKnown RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 ZBBXA8MT70 800 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 RFXAPO00287 272 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 DYNC1LI2O43237 492 aaPredicted RBP18.83■□□□□ 0.6
DDR1-250ENST00000503628 TLK2Q86UE8 772 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 FAM133AQ8N9E0 248 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 SCLYQ96I15 445 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 AP5M1Q9H0R1 490 aa18.83■□□□□ 0.6
DDR1-250ENST00000503628 SOWAHBA6NEL2 793 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 ERC2O15083 957 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
DDR1-250ENST00000503628 OAZ1P54368 228 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 PSMC6P62333 389 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 EPHX3Q9H6B9 360 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 MTCH2Q9Y6C9 303 aa18.82■□□□□ 0.6
DDR1-250ENST00000503628 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
DDR1-250ENST00000503628 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 SMPD1P17405 629 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 ZSCAN25Q6NSZ9 544 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 MKL1Q969V6 931 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 STRBPQ96SI9 672 aaKnown RBP18.81■□□□□ 0.6
DDR1-250ENST00000503628 LRFN3Q9BTN0 628 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 SEZ6LQ9BYH1 1024 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 CERS4Q9HA82 394 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 PDGFCQ9NRA1 345 aa18.81■□□□□ 0.6
DDR1-250ENST00000503628 ASB14A6NK59 587 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 GSG1L2A8MUP6 293 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 ZEB2O60315 1214 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
DDR1-250ENST00000503628 POU3F3P20264 500 aaPredicted RBP18.8■□□□□ 0.6
DDR1-250ENST00000503628 TTLL4Q14679 1199 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 TMEM63BQ5T3F8 832 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 CEP95Q96GE4 821 aa18.8■□□□□ 0.6
DDR1-250ENST00000503628 A1CFQ9NQ94 594 aaKnown RBP18.8■□□□□ 0.6
DDR1-250ENST00000503628 SCN5AQ14524 2016 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 GTPBP6O43824 516 aaPredicted RBP18.79■□□□□ 0.6
DDR1-250ENST00000503628 CA3P07451 260 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 BMP3P12645 472 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
DDR1-250ENST00000503628 KRT40Q6A162 431 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 IQSEC1Q6DN90 963 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 ZNF444Q8N0Y2 327 aaPredicted RBP18.79■□□□□ 0.6
DDR1-250ENST00000503628 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
DDR1-250ENST00000503628 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 MTMR4Q9NYA4 1195 aa18.79■□□□□ 0.6
DDR1-250ENST00000503628 EPOPA6NHQ4 379 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 TMEM232C9JQI7 657 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 PRDM1O75626 825 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 CYP2C9P11712 490 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 DEFB128Q7Z7B8 93 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 GMCL1P1Q8NEA9 526 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
DDR1-250ENST00000503628 ALDH8A1Q9H2A2 487 aaPredicted RBP18.78■□□□□ 0.6
DDR1-250ENST00000503628 ARIH1Q9Y4X5 557 aaPredicted RBP18.78■□□□□ 0.6
DDR1-250ENST00000503628 ZNF536O15090 1300 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 TLL1O43897 1013 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 TTLL1O95922 423 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 FDX1P10109 184 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 GIMAP6Q6P9H5 292 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 FBXO16Q8IX29 292 aaPredicted RBP18.77■□□□□ 0.6
DDR1-250ENST00000503628 CHMP4CQ96CF2 233 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 TRERF1Q96PN7 1200 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 TRMT13Q9NUP7 481 aaKnown RBP18.77■□□□□ 0.6
DDR1-250ENST00000503628 ISY1Q9ULR0 285 aaKnown RBP18.77■□□□□ 0.6
DDR1-250ENST00000503628 COG5Q9UP83 839 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 Q9Y3F1 56 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 HCN4Q9Y3Q4 1203 aa18.77■□□□□ 0.6
DDR1-250ENST00000503628 LRRC37A2A6NM11 1700 aa18.77■□□□□ 0.59
DDR1-250ENST00000503628 PFKMP08237 780 aa18.76■□□□□ 0.59
DDR1-250ENST00000503628 SYNPO2Q9UMS6 1093 aa18.76■□□□□ 0.59
DDR1-250ENST00000503628 SUPT20HL2P0C7V6 817 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 ALAS1P13196 640 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 STAT2P52630 851 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 TKFCQ3LXA3 575 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 TMEM31Q5JXX7 168 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 KIAA1211Q6ZU35 1233 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 ARNTL2Q8WYA1 636 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
DDR1-250ENST00000503628 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
DDR1-250ENST00000503628 TNKSO95271 1327 aa18.74■□□□□ 0.59
DDR1-250ENST00000503628 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
DDR1-250ENST00000503628 ARHGEF15O94989 841 aa18.74■□□□□ 0.59
DDR1-250ENST00000503628 SNAP25P60880 206 aa18.74■□□□□ 0.59
DDR1-250ENST00000503628 TAP1Q03518 808 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms