RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TNMDQ9H2S6 317 aa8.35□□□□□ -1.07
CPNE4-202ENST00000502818 VCPKMTQ9H867 229 aa8.35□□□□□ -1.07
CPNE4-202ENST00000502818 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
CPNE4-202ENST00000502818 CALML3P27482 149 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 LONRF3Q496Y0 759 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 CCDC174Q6PII3 467 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 CCDC73Q6ZRK6 1079 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
CPNE4-202ENST00000502818 GRAMD1CQ8IYS0 662 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 CCDC148Q8NFR7 591 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 TBCKQ8TEA7 893 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 SYAP1Q96A49 352 aaPredicted RBP8.34□□□□□ -1.07
CPNE4-202ENST00000502818 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 TSPY26PQ9H489 355 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 ARHGEF10LQ9HCE6 1279 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 PCDHA1Q9Y5I3 950 aa8.34□□□□□ -1.07
CPNE4-202ENST00000502818 SRPRBQ9Y5M8 271 aaKnown RBP8.34□□□□□ -1.07
CPNE4-202ENST00000502818 CCDC194A0A1B0GVG4 234 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 VWA3AA6NCI4 1184 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 CUTAO60888 179 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 ASNSP08243 561 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 ADCY7P51828 1080 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 ATP2C1P98194 919 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 MTMR2Q13614 643 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 LETM2Q2VYF4 491 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 HS1BP3Q53T59 392 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 RBM43Q6ZSC3 357 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 SMAP1Q8IYB5 467 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 PDILTQ8N807 584 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 C6orf50Q9HD87 102 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 DDX19AQ9NUU7 478 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 MEIS2O14770 477 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 SLC37A4O43826 429 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 CTNND1O60716 968 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 TDP2O95551 362 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 PRR29P0C7W0 189 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 PTPRAP18433 802 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 CASP1P29466 404 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 MMP14P50281 582 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 TYRO3Q06418 890 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 SPP2Q13103 211 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 ISM2Q6H9L7 571 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 APOBEC3FQ8IUX4 373 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 LRRC15Q8TF66 581 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 RIC8AQ9NPQ8 531 aa8.33□□□□□ -1.08
CPNE4-202ENST00000502818 ADARB2Q9NS39 739 aaKnown RBP8.33□□□□□ -1.08
CPNE4-202ENST00000502818 FAM237AA0A1B0GTK4 181 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 ESYT2A0FGR8 921 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 AP5Z1O43299 807 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 PEX10O60683 326 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 SYKP43405 635 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 STAT2P52630 851 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 C11orf57Q6ZUT1 292 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 REXO1Q8N1G1 1221 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 FEZ1Q99689 392 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 PSTPIP2Q9H939 334 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 SERTAD1Q9UHV2 236 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 NOL7Q9UMY1 257 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 BIN1O00499 593 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 POLR2DO15514 142 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 CCNT1O60563 726 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 YY1P25490 414 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 MSNP26038 577 aaKnown RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 GNA11P29992 359 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 PNOCQ13519 176 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 NONOQ15233 471 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-202ENST00000502818 FBXO11Q86XK2 927 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 ZHX2Q9Y6X8 837 aa8.32□□□□□ -1.08
CPNE4-202ENST00000502818 ZNF536O15090 1300 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 ATAD5Q96QE3 1844 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 VCAM1P19320 739 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 EPHX2P34913 555 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 TRAPPC10P48553 1259 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 ANO6Q4KMQ2 910 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
CPNE4-202ENST00000502818 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
CPNE4-202ENST00000502818 SLC30A10Q6XR72 485 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms