RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 VAV1P15498 845 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 NME1P15531 152 aaKnown RBP6.89□□□□□ -1.31
SMC4-224ENST00000494612 ZNF165P49910 485 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
SMC4-224ENST00000494612 OLFML2BQ68BL8 750 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 CNKSR3Q6P9H4 555 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 FRMD5Q7Z6J6 570 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 TMEM52Q8NDY8 209 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
SMC4-224ENST00000494612 A0A1W2PQ45 241 aaPredicted RBP6.88□□□□□ -1.31
SMC4-224ENST00000494612 A0A1W2PQY0 241 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 FGRP09769 529 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 PRKCAP17252 672 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 ENDOUP21128 410 aaKnown RBP6.88□□□□□ -1.31
SMC4-224ENST00000494612 ETFBP38117 255 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 SOX9P48436 509 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
SMC4-224ENST00000494612 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 GMLQ99445 158 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
SMC4-224ENST00000494612 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 PALD1Q9ULE6 856 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 TAF6LQ9Y6J9 622 aa6.88□□□□□ -1.31
SMC4-224ENST00000494612 ARL4AP40617 200 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 CYP4F8P98187 520 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 AUHQ13825 339 aaKnown RBP6.87□□□□□ -1.31
SMC4-224ENST00000494612 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 SLC6A18Q96N87 628 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 CRBNQ96SW2 442 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 SLC9A7Q96T83 725 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 TNFRSF12AQ9NP84 129 aa6.87□□□□□ -1.31
SMC4-224ENST00000494612 IRS2Q9Y4H2 1338 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 FAM86C2PA6NEL3 165 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 SUV39H1O43463 412 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 STK10O94804 968 aaKnown RBP6.86□□□□□ -1.31
SMC4-224ENST00000494612 EIF6P56537 245 aaKnown RBP6.86□□□□□ -1.31
SMC4-224ENST00000494612 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 RUFY4Q6ZNE9 571 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 TP53I13Q8NBR0 393 aaPredicted RBP6.86□□□□□ -1.31
SMC4-224ENST00000494612 CDADC1Q9BWV3 514 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
SMC4-224ENST00000494612 MEIS1O00470 390 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 SHOXO15266 292 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 RAB3GAP1Q15042 981 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 PPP2R5EQ16537 467 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 INTS3Q68E01 1043 aaKnown RBP6.85□□□□□ -1.31
SMC4-224ENST00000494612 TMC6Q7Z403 805 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 JMJD8Q96S16 334 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 MKRN2Q9H000 416 aaKnown RBP6.85□□□□□ -1.31
SMC4-224ENST00000494612 FBXL21Q9UKT6 434 aa6.85□□□□□ -1.31
SMC4-224ENST00000494612 NUDT19A8MXV4 375 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 IGFBP6P24592 240 aaPredicted RBP6.84□□□□□ -1.31
SMC4-224ENST00000494612 MVKQ03426 396 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
SMC4-224ENST00000494612 CRTC3Q6UUV7 619 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 NUP43Q8NFH3 380 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 UBXN4Q92575 508 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 SHDQ96IW2 340 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 IMPACTQ9P2X3 320 aa6.84□□□□□ -1.31
SMC4-224ENST00000494612 SUCOQ9UBS9 1254 aaKnown RBP6.84□□□□□ -1.31
SMC4-224ENST00000494612 SMAD7O15105 426 aaKnown RBP6.83□□□□□ -1.32
SMC4-224ENST00000494612 GSNP06396 782 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 ACRP10323 421 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 NCKAP1LP55160 1127 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 CAP1Q01518 475 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 RTP5Q14D33 572 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 HHIPL2Q6UWX4 724 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 C7orf61Q8IZ16 206 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 PWWP2AQ96N64 755 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 ZNRF3Q9ULT6 936 aa6.83□□□□□ -1.32
SMC4-224ENST00000494612 C9IYK1 514 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 AKAP8O43823 692 aaKnown RBP6.82□□□□□ -1.32
SMC4-224ENST00000494612 BUB1BO60566 1050 aaPredicted RBP6.82□□□□□ -1.32
SMC4-224ENST00000494612 MSL3P1P0C860 447 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 MAPKAPK2P49137 400 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 ANKS3Q6ZW76 656 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 HNRNPLLQ8WVV9 542 aaKnown RBP6.82□□□□□ -1.32
SMC4-224ENST00000494612 DHRS1Q96LJ7 313 aa6.82□□□□□ -1.32
SMC4-224ENST00000494612 CNOT11Q9UKZ1 510 aaKnown RBP6.82□□□□□ -1.32
SMC4-224ENST00000494612 K7ESM1 405 aa6.81□□□□□ -1.32
SMC4-224ENST00000494612 GIPRP48546 466 aa6.81□□□□□ -1.32
SMC4-224ENST00000494612 NR1I3Q14994 352 aa6.81□□□□□ -1.32
SMC4-224ENST00000494612 ZNF827Q17R98 1081 aa6.81□□□□□ -1.32
SMC4-224ENST00000494612 PLEKHN1Q494U1 663 aaPredicted RBP6.81□□□□□ -1.32
SMC4-224ENST00000494612 LSRQ86X29 649 aaPredicted RBP6.81□□□□□ -1.32
SMC4-224ENST00000494612 STRIP2Q9ULQ0 834 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms