RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 NSUN7Q8NE18 718 aaKnown RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 AGBL1Q96MI9 1066 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 DOCK3Q8IZD9 2030 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 SCG2P13521 617 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 ERCC3P19447 782 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 KIF22Q14807 665 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 CCDC82Q8N4S0 544 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 CLEC4DQ8WXI8 215 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 WASF1Q92558 559 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 ERO1AQ96HE7 468 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 GLT8D2Q9H1C3 349 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 BARHL2Q9NY43 387 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-210ENST00000490081 PCDHA1Q9Y5I3 950 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 ZNF236Q9UL36 1845 aa14.41□□□□□ -0.1
HDAC1-210ENST00000490081 ESYT2A0FGR8 921 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 SLC15A5A6NIM6 579 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 FDPSP14324 419 aaKnown RBP14.4□□□□□ -0.1
HDAC1-210ENST00000490081 PRMT2P55345 433 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 PLS1Q14651 629 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 NOL8Q76FK4 1167 aaKnown RBP14.4□□□□□ -0.1
HDAC1-210ENST00000490081 CTU1Q7Z7A3 348 aaKnown RBP14.4□□□□□ -0.1
HDAC1-210ENST00000490081 HOMER1Q86YM7 354 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 CCDC83Q8IWF9 413 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-210ENST00000490081 ZNF296Q8WUU4 475 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-210ENST00000490081 PHKBQ93100 1093 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 PORCNQ9H237 461 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 ACAD9Q9H845 621 aa14.4□□□□□ -0.1
HDAC1-210ENST00000490081 LOC102724159A0A0B4J2E5 919 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PEX10O60683 326 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 HOXC6P09630 235 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 FCER1AP12319 257 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 ALAS1P13196 640 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PTPREP23469 700 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 HOXD10P28358 340 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PSMC4P43686 418 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 FCGRTP55899 365 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 SNAP25P60880 206 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 MLLT1Q03111 559 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-210ENST00000490081 GRB14Q14449 540 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PWP2Q15269 919 aaKnown RBP14.39□□□□□ -0.11
HDAC1-210ENST00000490081 MORN1Q5T089 497 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 GALNT17Q6IS24 598 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-210ENST00000490081 GPR142Q7Z601 462 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 USP6NLQ92738 828 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 RNF146Q9NTX7 359 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 ORC3Q9UBD5 711 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-210ENST00000490081 GJD2Q9UKL4 321 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 DIS3Q9Y2L1 958 aaKnown RBP14.39□□□□□ -0.11
HDAC1-210ENST00000490081 PFASO15067 1338 aa14.39□□□□□ -0.11
HDAC1-210ENST00000490081 DNAJC25-GNG10A0A024R161 153 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 STXBP3O00186 592 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 OPLAHO14841 1288 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 XRCC5P13010 732 aaKnown RBP14.38□□□□□ -0.11
HDAC1-210ENST00000490081 HSD17B4P51659 736 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 WWC2Q6AWC2 1192 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 NCAPG2Q86XI2 1143 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
HDAC1-210ENST00000490081 SOCS4Q8WXH5 440 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 COA7Q96BR5 231 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 KIF3AQ9Y496 699 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 IVNS1ABPQ9Y6Y0 642 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 PLXNB2O15031 1838 aa14.38□□□□□ -0.11
HDAC1-210ENST00000490081 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
HDAC1-210ENST00000490081 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 PDIA4P13667 645 aaKnown RBP14.37□□□□□ -0.11
HDAC1-210ENST00000490081 XBP1P17861 261 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 CTGFP29279 349 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 IRF5Q13568 498 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 KCTD2Q14681 263 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 MUM1L1Q5H9M0 696 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 CCDC148Q8NFR7 591 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 TRIM47Q96LD4 638 aa14.37□□□□□ -0.11
HDAC1-210ENST00000490081 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
HDAC1-210ENST00000490081 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
HDAC1-210ENST00000490081 IGHA2P01877 340 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 GNA11P29992 359 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
HDAC1-210ENST00000490081 BECN1Q14457 450 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 USH1GQ495M9 461 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms