RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SIRT5Q9NXA8 310 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 AURKAO14965 403 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 N4BP3O15049 544 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 PPM1BO75688 479 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 MSL3P1P0C860 447 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-218ENST00000490032 CORO7P57737 925 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 PPP2R5DQ14738 602 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 PPP2R5EQ16537 467 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 JAMLQ86YT9 394 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 ARHGEF39Q8N4T4 335 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 ZNF513Q8N8E2 541 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-218ENST00000490032 ADCY4Q8NFM4 1077 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 NLGN2Q8NFZ4 835 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 SIGLEC10Q96LC7 697 aa6.41□□□□□ -1.38
HMGN1-218ENST00000490032 CGGBP1Q9UFW8 167 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-218ENST00000490032 CNOT6Q9ULM6 557 aaKnown RBP6.41□□□□□ -1.38
HMGN1-218ENST00000490032 IRS4O14654 1257 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-218ENST00000490032 TBC1D8O95759 1140 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 EPHB3P54753 998 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 GRB10Q13322 594 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 SSPNQ14714 243 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 ZNF385BQ569K4 471 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 EEF1DP3Q658K8 133 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 RPTNQ6XPR3 784 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 FGD4Q96M96 766 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 IRF2BPLQ9H1B7 796 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 KCTD3Q9Y597 815 aa6.4□□□□□ -1.38
HMGN1-218ENST00000490032 ADAMTS20P59510 1910 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 SRGAP3O43295 1099 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 L1CAMP32004 1257 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 CDR1P51861 262 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 NR1I3Q14994 352 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 KIAA1211LQ6NV74 962 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 VHLLQ6RSH7 139 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 ADAT2Q7Z6V5 191 aaKnown RBP6.39□□□□□ -1.39
HMGN1-218ENST00000490032 MZB1Q8WU39 189 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 PDLIM7Q9NR12 457 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 CCDC9Q9Y3X0 531 aaKnown RBP6.39□□□□□ -1.39
HMGN1-218ENST00000490032 IRAK3Q9Y616 596 aa6.39□□□□□ -1.39
HMGN1-218ENST00000490032 A0A1W2PQ27 194 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 A0A1W2PQ64 194 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 A0A1W2PQC6 194 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 ANKRD34BA5PLL1 514 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 NUDT19A8MXV4 375 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 RFXAPO00287 272 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 VAMP4O75379 141 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 DBHP09172 617 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 MAPKAPK2P49137 400 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 ZNF143P52747 638 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-218ENST00000490032 TMC6Q7Z403 805 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 LDHDQ86WU2 507 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 ANAPC16Q96DE5 110 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 RAPGEFL1Q9UHV5 662 aa6.38□□□□□ -1.39
HMGN1-218ENST00000490032 IRS2Q9Y4H2 1338 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 STXBP3O00186 592 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 CYBBP04839 570 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 PI3P19957 117 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 ERCC5P28715 1186 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-218ENST00000490032 AMPD2Q01433 879 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 PLEKHN1Q494U1 663 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-218ENST00000490032 PAQR3Q6TCH7 311 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 TTLL10Q6ZVT0 673 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 IGDCC3Q8IVU1 814 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 TMEM151BQ8IW70 566 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 DACT3Q96B18 629 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-218ENST00000490032 EPB41L4AQ9HCS5 686 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-218ENST00000490032 PCDHA5Q9Y5H7 936 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 BACE2Q9Y5Z0 518 aa6.37□□□□□ -1.39
HMGN1-218ENST00000490032 C2orf71A6NGG8 1288 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 TCF3P15923 654 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 NCAPHQ15003 741 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 DPY19L1Q2PZI1 675 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 TCERG1LQ5VWI1 586 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 ZC3H14Q6PJT7 736 aaKnown RBP6.36□□□□□ -1.39
HMGN1-218ENST00000490032 TMEFF1Q8IYR6 380 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 PANK1Q8TE04 598 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 APEX2Q9UBZ4 518 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 EMC9Q9Y3B6 208 aa6.36□□□□□ -1.39
HMGN1-218ENST00000490032 NAT2P11245 290 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 FBLN1P23142 703 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 SEPHS1P49903 392 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 VPS37DQ86XT2 251 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 APBA2Q99767 749 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 AKT3Q9Y243 479 aa6.35□□□□□ -1.39
HMGN1-218ENST00000490032 TRBV23OR9-2A0A075B6M9 112 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 A0A1W2PQJ5 194 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 GLI4P10075 376 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 IGFBP6P24592 240 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-218ENST00000490032 TNNI3KQ59H18 835 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 BICRALQ6AI39 1079 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 POMZP3Q6PJE2 187 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 FAM129CQ86XR2 697 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 CRACR2BQ8N4Y2 399 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-218ENST00000490032 BVESQ8NE79 360 aa6.34□□□□□ -1.39
HMGN1-218ENST00000490032 COPS5Q92905 334 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms