RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 MTIF2P46199 727 aaKnown RBP17.62■□□□□ 0.41
BRD9-208ENST00000489816 TCP10Q12799 353 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 MCM6Q14566 821 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TERF2Q15554 542 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 NEK8Q86SG6 692 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 GTPBP4Q9BZE4 634 aaKnown RBP17.62■□□□□ 0.41
BRD9-208ENST00000489816 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 LUC7L2Q9Y383 392 aaKnown RBP17.62■□□□□ 0.41
BRD9-208ENST00000489816 PCDHAC2Q9Y5I4 1007 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 SLC37A4O43826 429 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TUBB4AP04350 444 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 TUBGCP2Q9BSJ2 902 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 C6orf50Q9HD87 102 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 EXOC1Q9NV70 894 aa17.62■□□□□ 0.41
BRD9-208ENST00000489816 EPN1Q9Y6I3 576 aaPredicted RBP17.62■□□□□ 0.41
BRD9-208ENST00000489816 GYS1P13807 737 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 PPP4CP60510 307 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 REXO1Q8N1G1 1221 aaKnown RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 TRIM9Q9C026 710 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 DDX4Q9NQI0 724 aaKnown RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 H7C1D1 291 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 SNAP25P60880 206 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 CYP26C1Q6V0L0 522 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 ZMYND12Q9H0C1 365 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 SH3GLB2Q9NR46 395 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 REXO2Q9Y3B8 237 aaKnown RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 LAMB2P55268 1798 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 LRRC10BA6NIK2 292 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 STIM1Q13586 685 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 TMTC1Q8IUR5 882 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 DRC1Q96MC2 740 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 GDAP1L1Q96MZ0 367 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 DUSP9Q99956 384 aaKnown RBP17.61■□□□□ 0.41
BRD9-208ENST00000489816 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
BRD9-208ENST00000489816 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 MARCH6O60337 910 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 CC2D1AQ6P1N0 951 aaPredicted RBP17.6■□□□□ 0.41
BRD9-208ENST00000489816 C16orf86Q6ZW13 317 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 NEDD1Q8NHV4 660 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 GOLGA1Q92805 767 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
BRD9-208ENST00000489816 DAGLAQ9Y4D2 1042 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 WNK3Q9BYP7 1800 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 NDUFA10O95299 355 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 PLEKP08567 350 aaPredicted RBP17.6■□□□□ 0.41
BRD9-208ENST00000489816 TAL1P17542 331 aaPredicted RBP17.6■□□□□ 0.41
BRD9-208ENST00000489816 ARHGAP25P42331 645 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 SPAG1Q07617 926 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 CCDC155Q8N6L0 562 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 PNKPQ96T60 521 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 FAM207AQ9NSI2 230 aaPredicted RBP17.6■□□□□ 0.41
BRD9-208ENST00000489816 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
BRD9-208ENST00000489816 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 ZRANB2O95218 330 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■■■ 31
BRD9-208ENST00000489816 PDHBP11177 359 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 MRPS25P82663 173 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 TTI2Q6NXR4 508 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 OR8K1Q8NGG5 319 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 TTF2Q9UNY4 1162 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 PDS5AQ29RF7 1337 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 ZMYND10O75800 440 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 RSRC2Q7L4I2 434 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 NOA1Q8NC60 698 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 LRWD1Q9UFC0 647 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 CDC23Q9UJX2 597 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 TRIM37O94972 964 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 GNA11P29992 359 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 ST5P78524 1137 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 DDR1Q08345 913 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 KCNK18Q7Z418 384 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 GPR161Q8N6U8 529 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 GIMAP8Q8ND71 665 aaPredicted RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 ANKS1AQ92625 1134 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 PSMB7Q99436 277 aa17.59■□□□□ 0.41
BRD9-208ENST00000489816 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
BRD9-208ENST00000489816 FAM170AA1A519 330 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 CALCRLQ16602 461 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 CCDC122Q5T0U0 273 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms