RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 C6orf222P0C671 652 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-206ENST00000489451 RAG1P15918 1043 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 PDE1AP54750 535 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 BEX3Q00994 111 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 TTBK2Q6IQ55 1244 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-206ENST00000489451 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 FAM126BQ8IXS8 530 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
ACTN4-206ENST00000489451 GRIN2DO15399 1336 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 ELP1O95163 1332 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 ORC4O43929 436 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 TIMP1P01033 207 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
ACTN4-206ENST00000489451 FDX1P10109 184 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 ALX1Q15699 326 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 NUP133Q8WUM0 1156 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
ACTN4-206ENST00000489451 EVI5LQ96CN4 794 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 RNPC3Q96LT9 517 aaKnown RBP13.93□□□□□ -0.18
ACTN4-206ENST00000489451 TRERF1Q96PN7 1200 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 THEGQ9P2T0 379 aa13.93□□□□□ -0.18
ACTN4-206ENST00000489451 CTDP1Q9Y5B0 961 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-206ENST00000489451 CHD7Q9P2D1 2997 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 ARVCFO00192 962 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 CD4P01730 458 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 FGAP02671 866 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 ALAS1P13196 640 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 SMPD1P17405 629 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 FPGSQ05932 587 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-206ENST00000489451 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 SLC43A3Q8NBI5 491 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 GLT1D1Q96MS3 346 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.92□□□□□ -0.18
ACTN4-206ENST00000489451 RANBP17Q9H2T7 1088 aaKnown RBP13.92□□□□□ -0.18
ACTN4-206ENST00000489451 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
ACTN4-206ENST00000489451 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
ACTN4-206ENST00000489451 GBF1Q92538 1859 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 A0A0U1RQG5 324 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-206ENST00000489451 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
ACTN4-206ENST00000489451 SLC16A2P36021 539 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 TKFCQ3LXA3 575 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 RASIP1Q5U651 963 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 MFSD5Q6N075 450 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 BTNL9Q6UXG8 535 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 FBXO16Q8IX29 292 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-206ENST00000489451 PCSK9Q8NBP7 692 aaKnown RBP13.91□□□□□ -0.18
ACTN4-206ENST00000489451 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 ASB2Q96Q27 587 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 TMEM47Q9BQJ4 181 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 HELLSQ9NRZ9 838 aa13.91□□□□□ -0.18
ACTN4-206ENST00000489451 UMODL1Q5DID0 1318 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 REV3LO60673 3130 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 NFIBO00712 420 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 ICAM1P05362 532 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 HSPD1P10809 573 aaKnown RBP13.9□□□□□ -0.18
ACTN4-206ENST00000489451 CSF2RAP15509 400 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 TNFAIP2Q03169 654 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 IKQ13123 557 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-206ENST00000489451 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-206ENST00000489451 TMEM240Q5SV17 173 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 EEPD1Q7L9B9 569 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 CCPG1Q9ULG6 757 aa13.9□□□□□ -0.18
ACTN4-206ENST00000489451 ZMYM6O95789 1325 aa13.9□□□□□ -0.19
ACTN4-206ENST00000489451 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
ACTN4-206ENST00000489451 ASB14A6NK59 587 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 ACRP10323 421 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 PDHBP11177 359 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 DNAJB2P25686 324 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 HAND2P61296 217 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 GRIN2CQ14957 1233 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 MCMDC2Q4G0Z9 681 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 CLEC4DQ8WXI8 215 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 PPP1R12CQ9BZL4 782 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-206ENST00000489451 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
ACTN4-206ENST00000489451 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 SNHG28P0DPA3 235 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 PBX2P40425 430 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms