RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	SLC12A9	Q9BXP2	914 aa		5.2	□□□□□ -1.58
CD46-215	ENST00000488596	PLA2G2D	Q9UNK4	145 aa		5.2	□□□□□ -1.58
CD46-215	ENST00000488596	INPP5F	Q9Y2H2	1132 aa		5.2	□□□□□ -1.58
CD46-215	ENST00000488596	HCFC2	Q9Y5Z7	792 aa		5.2	□□□□□ -1.58
CD46-215	ENST00000488596	FAM86C2P	A6NEL3	165 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ACR	P10323	421 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ENDOU	P21128	410 aa	Known RBP	5.19	□□□□□ -1.58
CD46-215	ENST00000488596	LIMS1	P48059	325 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	MAPKAPK2	P49137	400 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ZNF165	P49910	485 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ZC3H6	P61129	1189 aa	Known RBP	5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ZNF200	P98182	395 aa	Predicted RBP	5.19	□□□□□ -1.58
CD46-215	ENST00000488596	APOBR	Q0VD83	1088 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.19	□□□□□ -1.58
CD46-215	ENST00000488596	SLITRK4	Q8IW52	837 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	TEPSIN	Q96N21	525 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	PRR13	Q9NZ81	148 aa		5.19	□□□□□ -1.58
CD46-215	ENST00000488596	SUCO	Q9UBS9	1254 aa	Known RBP	5.19	□□□□□ -1.58
CD46-215	ENST00000488596	ZC3H12D	A2A288	527 aa	Known RBP	5.18	□□□□□ -1.58
CD46-215	ENST00000488596	GSN	P06396	782 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	GSTM1	P09488	218 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.18	□□□□□ -1.58
CD46-215	ENST00000488596	ZC3H14	Q6PJT7	736 aa	Known RBP	5.18	□□□□□ -1.58
CD46-215	ENST00000488596	FRMD5	Q7Z6J6	570 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	C7orf61	Q8IZ16	206 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	NKD1	Q969G9	470 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	TINF2	Q9BSI4	451 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596	DSCC1	Q9BVC3	393 aa		5.18	□□□□□ -1.58
CD46-215	ENST00000488596		H0Y8X5	98 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596	PRICKLE3	O43900	615 aa	Predicted RBP	5.17	□□□□□ -1.58
CD46-215	ENST00000488596	DBH	P09172	617 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596	SLURP1	P55000	103 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596	NR1I3	Q14994	352 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596	CCDC144CP	Q8IYA2	1237 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596	NT5C1A	Q9BXI3	368 aa		5.17	□□□□□ -1.58
CD46-215	ENST00000488596		A0A1B0GTL3	188 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596		A0A1W2PQ27	194 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596		A0A1W2PQ64	194 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596		A0A1W2PQC6	194 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596		A0A1W2PQD8	194 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	PLA2G1B	P04054	148 aa	Known RBP	5.16	□□□□□ -1.58
CD46-215	ENST00000488596	ATF2	P15336	505 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	FBLN1	P23142	703 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	DNAJA1	P31689	397 aa	Known RBP	5.16	□□□□□ -1.58
CD46-215	ENST00000488596	KCNC1	P48547	511 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	CAP1	Q01518	475 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	PLP2	Q04941	152 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	RTP5	Q14D33	572 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	SPATS1	Q496A3	300 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	VWA3B	Q502W6	1294 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	TDRD10	Q5VZ19	366 aa	Known RBP	5.16	□□□□□ -1.58
CD46-215	ENST00000488596	HLA-DQA1	Q5Y7H0	255 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	DCAF15	Q66K64	600 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	INTS3	Q68E01	1043 aa	Known RBP	5.16	□□□□□ -1.58
CD46-215	ENST00000488596	PAQR3	Q6TCH7	311 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	PPFIBP1	Q86W92	1011 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	ADGRG2	Q8IZP9	1017 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	NAT16	Q8N8M0	369 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	BRF1	Q92994	677 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	GPRASP2	Q96D09	838 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	C8orf37	Q96NL8	207 aa		5.16	□□□□□ -1.58
CD46-215	ENST00000488596	FGF10	O15520	208 aa	Predicted RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	CYBB	P04839	570 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	PFKL	P17858	780 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	GJA8	P48165	433 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	ZNF445	P59923	1031 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	FOXO4	P98177	505 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	EFEMP1	Q12805	493 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	GNL2	Q13823	731 aa	Known RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	CWF19L1	Q69YN2	538 aa	Known RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	LSR	Q86X29	649 aa	Predicted RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	JAML	Q86YT9	394 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	NLGN1	Q8N2Q7	840 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	DHRS1	Q96LJ7	313 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	FCRL3	Q96P31	734 aa	Predicted RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	BDH2	Q9BUT1	245 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	SRRT	Q9BXP5	876 aa	Known RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	GINM1	Q9NU53	330 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.15	□□□□□ -1.59
CD46-215	ENST00000488596	EFR3B	Q9Y2G0	817 aa		5.15	□□□□□ -1.59
CD46-215	ENST00000488596	SRGAP3	O43295	1099 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	ATF4	P18848	351 aa	Predicted RBP	5.14	□□□□□ -1.59
CD46-215	ENST00000488596	PMS1	P54277	932 aa	Known RBP	5.14	□□□□□ -1.59
CD46-215	ENST00000488596	PRR5	P85299	388 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	KRTAP1-1	Q07627	177 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	ANKRD39	Q53RE8	183 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.14	□□□□□ -1.59
CD46-215	ENST00000488596	BICRAL	Q6AI39	1079 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	VPS37D	Q86XT2	251 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	SLC43A3	Q8NBI5	491 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	RASGRP4	Q8TDF6	673 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	FNIP1	Q8TF40	1166 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	GP6	Q9HCN6	339 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	PDLIM7	Q9NR12	457 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	SUSD2	Q9UGT4	822 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596	ZNRF3	Q9ULT6	936 aa		5.14	□□□□□ -1.59
CD46-215	ENST00000488596		F8W031	263 aa	Predicted RBP	5.13	□□□□□ -1.59
CD46-215	ENST00000488596	TP53	P04637	393 aa	Predicted RBP	5.13	□□□□□ -1.59
CD46-215	ENST00000488596	TACR1	P25103	407 aa		5.13	□□□□□ -1.59
CD46-215	ENST00000488596	MC3R	P41968	323 aa		5.13	□□□□□ -1.59

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