RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 CTR9Q6PD62 1173 aa19.6■□□□□ 0.73
TOM1-214ENST00000487670 NOL8Q76FK4 1167 aaKnown RBP19.6■□□□□ 0.73
TOM1-214ENST00000487670 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
TOM1-214ENST00000487670 SLC38A10Q9HBR0 1119 aa19.6■□□□□ 0.73
TOM1-214ENST00000487670 NLRC5Q86WI3 1866 aa19.6■□□□□ 0.73
TOM1-214ENST00000487670 F5H6K3 240 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 ATP2A1O14983 1001 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 DYNC1LI2O43237 492 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 GTPBP6O43824 516 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 KLRC3Q07444 240 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 CEP85Q6P2H3 762 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 TMED8Q6PL24 325 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 TMCO2Q7Z6W1 182 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 FBXO16Q8IX29 292 aaPredicted RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 FAM133AQ8N9E0 248 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 PURBQ96QR8 312 aaKnown RBP19.59■□□□□ 0.73
TOM1-214ENST00000487670 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 COG5Q9UP83 839 aa19.59■□□□□ 0.73
TOM1-214ENST00000487670 LCHNA4D1U4 455 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 PI4K2BG5E9Z4 385 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 RASA1P20936 1047 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 EEPD1Q7L9B9 569 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 PRPF38AQ8NAV1 312 aaKnown RBP19.58■□□□□ 0.72
TOM1-214ENST00000487670 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 HLA-CQ95604 372 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 CHMP4CQ96CF2 233 aa19.58■□□□□ 0.72
TOM1-214ENST00000487670 ALDH8A1Q9H2A2 487 aaPredicted RBP19.58■□□□□ 0.72
TOM1-214ENST00000487670 TAPT1Q6NXT6 567 aa19.57■□□□□ 0.72
TOM1-214ENST00000487670 ANKS1AQ92625 1134 aa19.57■□□□□ 0.72
TOM1-214ENST00000487670 A1CFQ9NQ94 594 aaKnown RBP19.57■□□□□ 0.72
TOM1-214ENST00000487670 MICAL3Q7RTP6 2002 aa19.56■□□□□ 0.72
TOM1-214ENST00000487670 ZBED4O75132 1171 aa19.56■□□□□ 0.72
TOM1-214ENST00000487670 MRE11P49959 708 aa19.56■□□□□ 0.72
TOM1-214ENST00000487670 RPUSD2Q8IZ73 545 aaKnown RBP19.56■□□□□ 0.72
TOM1-214ENST00000487670 LRRC47Q8N1G4 583 aaKnown RBP19.56■□□□□ 0.72
TOM1-214ENST00000487670 SLC4A4Q9Y6R1 1079 aa19.56■□□□□ 0.72
TOM1-214ENST00000487670 CFAP54Q96N23 3096 aa19.56■□□□□ 0.72
TOM1-214ENST00000487670 ZNF536O15090 1300 aa19.55■□□□□ 0.72
TOM1-214ENST00000487670 MYO7AQ13402 2215 aa19.55■□□□□ 0.72
TOM1-214ENST00000487670 SNAP25P60880 206 aa19.55■□□□□ 0.72
TOM1-214ENST00000487670 RASGRP2Q7LDG7 609 aa19.55■□□□□ 0.72
TOM1-214ENST00000487670 RHPN1Q8TCX5 695 aa19.55■□□□□ 0.72
TOM1-214ENST00000487670 PUS7LQ9H0K6 701 aaKnown RBP19.55■□□□□ 0.72
TOM1-214ENST00000487670 TNKSO95271 1327 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 IGKV6D-41A0A0C4DH26 115 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 CABYRO75952 493 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 HERC6Q8IVU3 1022 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 ITPRIPQ8IWB1 547 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 CHST13Q8NET6 341 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 BOLA2Q9H3K6 86 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 PAG1Q9NWQ8 432 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 NYAP2Q9P242 653 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 CLIP2Q9UDT6 1046 aa19.54■□□□□ 0.72
TOM1-214ENST00000487670 MYH7BA7E2Y1 1941 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 TCTN1Q2MV58 587 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 MUM1L1Q5H9M0 696 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 SLC9A7Q96T83 725 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 AP5M1Q9H0R1 490 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 RNF146Q9NTX7 359 aa19.53■□□□□ 0.72
TOM1-214ENST00000487670 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
TOM1-214ENST00000487670 IL9P15248 144 aa19.52■□□□□ 0.72
TOM1-214ENST00000487670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.52■□□□□ 0.72
TOM1-214ENST00000487670 ACAD9Q9H845 621 aa19.52■□□□□ 0.72
TOM1-214ENST00000487670 CTDP1Q9Y5B0 961 aaPredicted RBP19.52■□□□□ 0.72
TOM1-214ENST00000487670 KIAA1217Q5T5P2 1943 aa19.52■□□□□ 0.72
TOM1-214ENST00000487670 PRDM1O75626 825 aa19.51■□□□□ 0.71
TOM1-214ENST00000487670 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
TOM1-214ENST00000487670 FBXO40Q9UH90 709 aa19.51■□□□□ 0.71
TOM1-214ENST00000487670 MTUS1Q9ULD2 1270 aa19.51■□□□□ 0.71
TOM1-214ENST00000487670 PRR33A8MZF0 331 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 PFKMP08237 780 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 DEFB103AP81534 67 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 PURAQ00577 322 aaKnown RBP19.5■□□□□ 0.71
TOM1-214ENST00000487670 NHLH1Q02575 133 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 GPNMBQ14956 572 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 ERC1Q8IUD2 1116 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 FAM178BQ8IXR5 827 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.5■□□□□ 0.71
TOM1-214ENST00000487670 UIMC1Q96RL1 719 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 UBE2ZQ9H832 354 aaPredicted RBP19.5■□□□□ 0.71
TOM1-214ENST00000487670 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
TOM1-214ENST00000487670 MYL3P08590 195 aa19.49■□□□□ 0.71
TOM1-214ENST00000487670 IQCF3P0C7M6 154 aa19.49■□□□□ 0.71
TOM1-214ENST00000487670 AMOTL1Q8IY63 956 aa19.49■□□□□ 0.71
TOM1-214ENST00000487670 EPB41L4AQ9HCS5 686 aaPredicted RBP19.49■□□□□ 0.71
TOM1-214ENST00000487670 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
TOM1-214ENST00000487670 ASB14A6NK59 587 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 MINDY4BA8MYZ0 360 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 ALAS1P13196 640 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 OAZ1P54368 228 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 NBPF20Q3BBV1 942 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 FAM47CQ5HY64 1035 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 KIAA1211Q6ZU35 1233 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 SNX27Q96L92 541 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 TRERF1Q96PN7 1200 aa19.48■□□□□ 0.71
TOM1-214ENST00000487670 PHOX2BQ99453 314 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms