RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 KIF5AQ12840 1032 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 SPA17Q15506 151 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 ZNF444Q8N0Y2 327 aaPredicted RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 CCDC155Q8N6L0 562 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 TRIM58Q8NG06 486 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 PURBQ96QR8 312 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 REXO2Q9Y3B8 237 aaKnown RBP13.86□□□□□ -0.19
TMEM39B-208ENST00000487305 PVALEFA0A1B0GWK0 134 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 STXBP3O00186 592 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 CLSTN1O94985 981 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 ST5P78524 1137 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 NONOQ15233 471 aaKnown RBP eCLIP13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 ZNF572Q7Z3I7 529 aaPredicted RBP13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 CABP7Q86V35 215 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 CHP1Q99653 195 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
TMEM39B-208ENST00000487305 A6NNZ2 444 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 H3BQF6 201 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 LMAN1P49257 510 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 TUBB8Q3ZCM7 444 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 WDR59Q6PJI9 974 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 CALML4Q96GE6 196 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 NUCKS1Q9H1E3 243 aaKnown RBP13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 ZCCHC17Q9NP64 241 aaKnown RBP13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 JRKLQ9Y4A0 524 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 RNF225M0QZC1 329 aaPredicted RBP13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 SLC26A4O43511 780 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 NMT2O60551 498 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 PLCG2P16885 1265 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 VAV2P52735 878 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 PSMD2Q13200 908 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 SEPT2Q15019 361 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 C15orf52Q6ZUT6 534 aaKnown RBP13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 VPS18Q9P253 973 aa13.84□□□□□ -0.19
TMEM39B-208ENST00000487305 LCA5LO95447 670 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 HERVK_113P62684 666 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 SOGA3Q5TF21 947 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 NEK8Q86SG6 692 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 NEK11Q8NG66 645 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 NHEJ1Q9H9Q4 299 aaPredicted RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 TACC1O75410 805 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 CDC25AP30304 524 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 MTIF2P46199 727 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 LRRC63Q05C16 580 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 PDE4DQ08499 809 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 RRP36Q96EU6 259 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 SETDB2Q96T68 719 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 LUC7LQ9NQ29 371 aaKnown RBP13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 NARFQ9UHQ1 456 aa13.83□□□□□ -0.2
TMEM39B-208ENST00000487305 COL24A1Q17RW2 1714 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 MYH1P12882 1939 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 A0A0U1RQJ8 604 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 SMIM22K7EJ46 135 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 CAPN2P17655 700 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 TCP1P17987 556 aaKnown RBP13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 PRDX5P30044 214 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 INF2Q27J81 1249 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 CENPPQ6IPU0 288 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 MARCH10Q8NA82 808 aaPredicted RBP13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 CCDC102AQ96A19 550 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 ALS2CR12Q96Q35 445 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 TMEM60Q9H2L4 133 aa13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
TMEM39B-208ENST00000487305 FLT1P17948 1338 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms