RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 MRPS27Q92552 414 aaKnown RBP9.16□□□□□ -0.94
ZNF541-204ENST00000487275 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 CXCL11O14625 94 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 TAL1P17542 331 aaPredicted RBP9.15□□□□□ -0.94
ZNF541-204ENST00000487275 LIG1P18858 919 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 PTPREP23469 700 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 MCM7P33993 719 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
ZNF541-204ENST00000487275 FKBP1BP68106 108 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 PPIL2Q13356 520 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 LETM2Q2VYF4 491 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 CATSPERGQ6ZRH7 1159 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 NEK8Q86SG6 692 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 TBCKQ8TEA7 893 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 CNKSR2Q8WXI2 1034 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 OPTNQ96CV9 577 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 SLC38A10Q9HBR0 1119 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 GBA2Q9HCG7 927 aaPredicted RBP9.15□□□□□ -0.94
ZNF541-204ENST00000487275 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
ZNF541-204ENST00000487275 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
ZNF541-204ENST00000487275 MORC2Q9Y6X9 1032 aaPredicted RBP9.15□□□□□ -0.94
ZNF541-204ENST00000487275 MYPNQ86TC9 1320 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 GCOM1H8Y6P7 765 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 WNT7AO00755 349 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 IRF6O14896 467 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 CCNT1O60563 726 aaKnown RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 LETM1O95202 739 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 CELF2O95319 508 aaKnown RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 FOSP01100 380 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 POLR2MP0CAP2 368 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 CMA1P23946 247 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 DSG3P32926 999 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 PTGDRQ13258 359 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 COG2Q14746 738 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 LDLRAD1Q5T700 205 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 GADL1Q6ZQY3 521 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 CPXCR1Q8N123 301 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 C2orf69Q8N8R5 385 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 FERMT2Q96AC1 680 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 ATG4CQ96DT6 458 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 CLIC6Q96NY7 704 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 NAP1L4Q99733 375 aaKnown RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 ANO3Q9BYT9 981 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 HOXC10Q9NYD6 342 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 DACT1Q9NYF0 836 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 FBXO2Q9UK22 296 aaPredicted RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 KCNH4Q9UQ05 1017 aa9.14□□□□□ -0.95
ZNF541-204ENST00000487275 SRPRBQ9Y5M8 271 aaKnown RBP9.14□□□□□ -0.95
ZNF541-204ENST00000487275 OTOFQ9HC10 1997 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 ZNF536O15090 1300 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 PHIPQ8WWQ0 1821 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 A0A0G2JLL6 359 aaPredicted RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 VWA5AO00534 786 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 MEIS2O14770 477 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 NEMFO60524 1076 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 KINO60870 393 aaKnown RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 CFBP00751 764 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 ALAS1P13196 640 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 IRX3P78415 501 aaPredicted RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 ATP2C1P98194 919 aaPredicted RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 FAM160A1Q05DH4 1040 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 PRRT2Q7Z6L0 340 aaPredicted RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 MCF2L2Q86YR7 1114 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
ZNF541-204ENST00000487275 NUP62CLQ9H1M0 184 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 GOLPH3LQ9H4A5 285 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 EHMT1Q9H9B1 1298 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 MRVI1Q9Y6F6 885 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
ZNF541-204ENST00000487275 UTRNP46939 3433 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms