RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 USP2O75604 605 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 PTPRAP18433 802 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 MARCKSP29966 332 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 USP14P54578 494 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 ATP2C1P98194 919 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 FAM160A1Q05DH4 1040 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 TRAF1Q13077 416 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 ORC2Q13416 577 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 RBM43Q6ZSC3 357 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 FBXO11Q86XK2 927 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 REXO1Q8N1G1 1221 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 KRI1Q8N9T8 703 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 C12orf42Q96LP6 360 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 FEZ1Q99689 392 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 AMNQ9BXJ7 453 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 RANBP17Q9H2T7 1088 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 CLSTN2Q9H4D0 955 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 PICK1Q9NRD5 415 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 DACT1Q9NYF0 836 aa9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 SRPRBQ9Y5M8 271 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-209ENST00000487118 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 MRPL12P52815 198 aaKnown RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 IKQ13123 557 aaPredicted RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 SNW1Q13573 536 aaKnown RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 NONOQ15233 471 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 ZYXQ15942 572 aaKnown RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 CST9Q5W186 159 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 RESP18Q5W5W9 173 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 MCTP2Q6DN12 878 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 SHC4Q6S5L8 630 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 LRSAM1Q6UWE0 723 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 KRT26Q7Z3Y9 468 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 FMR1NBQ8N0W7 255 aaPredicted RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 CUL5Q93034 780 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 HPSEQ9Y251 543 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 PCDHA1Q9Y5I3 950 aa9.81□□□□□ -0.84
NUDCD3-209ENST00000487118 SYCE3A1L190 88 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 C19orf81C9J6K1 198 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 NDUFA8P51970 172 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 BACE1P56817 501 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 SNAP25P60880 206 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 SPP2Q13103 211 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 MTMR2Q13614 643 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 ZNF174Q15697 407 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 MAP3K11Q16584 847 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 INF2Q27J81 1249 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 ARL6IP4Q66PJ3 421 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 NEK8Q86SG6 692 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 PNMA8AQ86V59 439 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 GAS2L3Q86XJ1 694 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 CDCA5Q96FF9 252 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 CLIC6Q96NY7 704 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 FUCA2Q9BTY2 467 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 PSTPIP2Q9H939 334 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 TMEM260Q9NX78 707 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 SNCAIPQ9Y6H5 919 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 OTOFQ9HC10 1997 aa9.8□□□□□ -0.84
NUDCD3-209ENST00000487118 THSD7BQ9C0I4 1608 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 A0A1B0GVL5 298 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 LAD1O00515 517 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 CTAGE5O15320 804 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 EDIL3O43854 480 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 PFKFB1P16118 471 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 VCAM1P19320 739 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 GRIN1Q05586 938 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 PTGDRQ13258 359 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 VGLL4Q14135 290 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 UBE2SQ16763 222 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 JAKMIP3Q5VZ66 844 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 DLK2Q6UY11 383 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 PRPF38AQ8NAV1 312 aaKnown RBP9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 TBCKQ8TEA7 893 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 CAPNS2Q96L46 248 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 TIGD1Q96MW7 591 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 FBXO28Q9NVF7 368 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 AFG3L2Q9Y4W6 797 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 MRVI1Q9Y6F6 885 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 ABCB11O95342 1321 aa9.79□□□□□ -0.84
NUDCD3-209ENST00000487118 PARP14Q460N5 1801 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 GOLGA6L3A6NEY3 463 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms