RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TRIM14Q14142 442 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 WDR24Q96S15 920 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 VPS16Q9H269 839 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 DDX41Q9UJV9 622 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 ADGRG1Q9Y653 693 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 QSER1Q2KHR3 1735 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 LRRC15Q8TF66 581 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 PLIN2Q99541 437 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 MRPL44Q9H9J2 332 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 ATP6V0A2Q9Y487 856 aa20.23■□□□□ 0.83
PDLIM7-207ENST00000486828 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 PLCG1P19174 1290 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 PICALMQ13492 652 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 STIM1Q13586 685 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 ASPRV1Q53RT3 343 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 GIMAP8Q8ND71 665 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 UBA5Q9GZZ9 404 aa20.22■□□□□ 0.83
PDLIM7-207ENST00000486828 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 IRF2BP1Q8IU81 584 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 MNS1Q8NEH6 495 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 TRIM49BA6NDI0 452 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 SNHG28P0DPA3 235 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 H2AFXP16104 143 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 MAP3K9P80192 1104 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 THAP9Q9H5L6 903 aa20.21■□□□□ 0.83
PDLIM7-207ENST00000486828 FRMPD2Q68DX3 1309 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 C10orf71Q711Q0 1435 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 PSMA7O14818 248 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 TADA3O75528 432 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 AKR1B1P15121 316 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 EEF1GP26641 437 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 PMS1P54277 932 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 NLGN1Q8N2Q7 840 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 UBXN4Q92575 508 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 CARD6Q9BX69 1037 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 ABHD10Q9NUJ1 306 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 BIN2Q9UBW5 565 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
PDLIM7-207ENST00000486828 EFCAB8A8MWE9 144 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 JAKMIP3Q5VZ66 844 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 TMTC1Q8IUR5 882 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 CERS5Q8N5B7 392 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 MRFAP1Q9Y605 127 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 TECP42680 631 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 UBXN1Q04323 297 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 ARHGAP29Q52LW3 1261 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 CREBRFQ8IUR6 639 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 NOC3LQ8WTT2 800 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 CCDC47Q96A33 483 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 TMEM260Q9NX78 707 aa20.19■□□□□ 0.82
PDLIM7-207ENST00000486828 ADCY7P51828 1080 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 MSL1Q68DK7 614 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 TTI2Q6NXR4 508 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 MMTAG2Q9BU76 263 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 GTPBP4Q9BZE4 634 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 ZC3H12CQ9C0D7 883 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 TTF2Q9UNY4 1162 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 MYH8P13535 1937 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
PDLIM7-207ENST00000486828 LGALS16A8MUM7 142 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 TTLL1O95922 423 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 ERVK-24P63145 666 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 MB21D1Q8N884 522 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 MTMR9Q96QG7 549 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 LZTFL1Q9NQ48 299 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 USP40Q9NVE5 1235 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 SERPINB13Q9UIV8 391 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 A0A1W2PQC6 194 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 RNF225M0QZC1 329 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 PPP1R2P41236 205 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 AMPD3Q01432 767 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 PPP1R18Q6NYC8 613 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 CYP26C1Q6V0L0 522 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 COA7Q96BR5 231 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 EXOC1Q9NV70 894 aa20.17■□□□□ 0.82
PDLIM7-207ENST00000486828 SRGNP10124 158 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 NPR1P16066 1061 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 PDE4DQ08499 809 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 ZNF507Q8TCN5 953 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 MAGEC2Q9UBF1 373 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms