RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
COPS3-209ENST00000486810 JMJD8Q96S16 334 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 KCNH1O95259 989 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 ITGAVP06756 1048 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 NOP2P46087 812 aaKnown RBP7.1□□□□□ -1.27
COPS3-209ENST00000486810 HSP90AA2PQ14568 343 aaPredicted RBP7.1□□□□□ -1.27
COPS3-209ENST00000486810 OGFOD2Q6N063 350 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 TRIM59Q8IWR1 403 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 CNPY4Q8N129 248 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 PTCHD1Q96NR3 888 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 KCNK12Q9HB15 430 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 GPR160Q9UJ42 338 aa7.1□□□□□ -1.27
COPS3-209ENST00000486810 WASHC2CQ9Y4E1 1318 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
COPS3-209ENST00000486810 RTP1P59025 263 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 SLC10A6Q3KNW5 377 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 ZNF227Q86WZ6 799 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 SIRT2Q8IXJ6 389 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
COPS3-209ENST00000486810 MSRB2Q9Y3D2 182 aa7.09□□□□□ -1.27
COPS3-209ENST00000486810 PPM1GO15355 546 aaPredicted RBP7.08□□□□□ -1.28
COPS3-209ENST00000486810 GTF2F1P35269 517 aaKnown RBP eCLIP7.08□□□□□ -1.28
COPS3-209ENST00000486810 AMPD2Q01433 879 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 RBL2Q08999 1139 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 MLANAQ16655 118 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 SV2CQ496J9 727 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 GTF2IRD2BQ6EKJ0 949 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 GTF2IRD2Q86UP8 949 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 COPS5Q92905 334 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 CWC22Q9HCG8 908 aaKnown RBP7.08□□□□□ -1.28
COPS3-209ENST00000486810 R3HCC1Q9Y3T6 440 aaKnown RBP7.08□□□□□ -1.28
COPS3-209ENST00000486810 BACE2Q9Y5Z0 518 aa7.08□□□□□ -1.28
COPS3-209ENST00000486810 A0A1W2PQ45 241 aaPredicted RBP7.07□□□□□ -1.28
COPS3-209ENST00000486810 A0A1W2PQY0 241 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 C2orf71A6NGG8 1288 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 ARNTLO00327 626 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 NAT2P11245 290 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 MESP2Q0VG99 397 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 SNX17Q15036 470 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 SF1Q15637 639 aaKnown RBP7.07□□□□□ -1.28
COPS3-209ENST00000486810 SLC14A2Q15849 920 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 EEPD1Q7L9B9 569 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 CKAP2LQ8IYA6 745 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 FAM43AQ8N2R8 423 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 INTS4Q96HW7 963 aaKnown RBP7.07□□□□□ -1.28
COPS3-209ENST00000486810 NKX2-4Q9H2Z4 354 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 IMPACTQ9P2X3 320 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 ACSL6Q9UKU0 697 aa7.07□□□□□ -1.28
COPS3-209ENST00000486810 LRRC10BA6NIK2 292 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 GRIA2P42262 883 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 MVKQ03426 396 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 SCRN1Q12765 414 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 SERINC3Q13530 473 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 CYP2R1Q6VVX0 501 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 NAT16Q8N8M0 369 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 ARMC5Q96C12 935 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 GPRC5CQ9NQ84 441 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 KCNG1Q9UIX4 513 aa7.06□□□□□ -1.28
COPS3-209ENST00000486810 A0A1W2PQU0 124 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 WTIPA6NIX2 430 aaPredicted RBP7.05□□□□□ -1.28
COPS3-209ENST00000486810 NOP56O00567 594 aaKnown RBP7.05□□□□□ -1.28
COPS3-209ENST00000486810 PPP1R11O60927 126 aaPredicted RBP7.05□□□□□ -1.28
COPS3-209ENST00000486810 THBDP07204 575 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 PRKCAP17252 672 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 SDHBP21912 280 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 HLA-DQA1Q5Y7H0 255 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 EEF1DP3Q658K8 133 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 MBLAC2Q68D91 279 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 POMZP3Q6PJE2 187 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 MPZL3Q6UWV2 235 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 POU5F2Q8N7G0 328 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 ANP32BQ92688 251 aaKnown RBP7.05□□□□□ -1.28
COPS3-209ENST00000486810 ZNF622Q969S3 477 aaKnown RBP eCLIP7.05□□□□□ -1.28
COPS3-209ENST00000486810 DIRC2Q96SL1 478 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 CRTAC1Q9NQ79 661 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 CYP26B1Q9NR63 512 aa7.05□□□□□ -1.28
COPS3-209ENST00000486810 MAFGO15525 162 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 PNLIPP16233 465 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 ZNF648Q5T619 568 aaPredicted RBP7.04□□□□□ -1.28
COPS3-209ENST00000486810 CPNE8Q86YQ8 564 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 NPLOC4Q8TAT6 608 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 DNAJC2Q99543 621 aaKnown RBP7.04□□□□□ -1.28
COPS3-209ENST00000486810 TRIM55Q9BYV6 548 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 EPN3Q9H201 632 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
COPS3-209ENST00000486810 FAM53CQ9NYF3 392 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 CLEC1BQ9P126 229 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 TMEFF2Q9UIK5 374 aaPredicted RBP7.04□□□□□ -1.28
COPS3-209ENST00000486810 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
COPS3-209ENST00000486810 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms