RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 USH1GQ495M9 461 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 FAM173BQ6P4H8 233 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 GTF3C2Q8WUA4 911 aaPredicted RBP15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 ATG4CQ96DT6 458 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 SPATA32Q96LK8 384 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 RCOR1Q9UKL0 485 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 CCPG1Q9ULG6 757 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
VTI1BP1-201ENST00000486325 YEATS4O95619 227 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 GJA5P36382 358 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 ZNF157P51786 506 aaPredicted RBP15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 ANO1Q5XXA6 986 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 RGMBQ6NW40 437 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 SAPCD2Q86UD0 394 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 CPXCR1Q8N123 301 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 TMEM87AQ8NBN3 555 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 CCDC102AQ96A19 550 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 HHIPL1Q96JK4 782 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 ZNF536O15090 1300 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 ELP1O95163 1332 aa15.16■□□□□ 0.02
VTI1BP1-201ENST00000486325 CCL15-CCL14A0A0B4J2E2 113 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 TMEM88BA6NKF7 163 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 SPDYE16A6NNV3 312 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 GCOM1H8Y6P7 765 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 POLR2MP0CAP2 368 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 INHBEP58166 350 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 AP3B2Q13367 1082 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 MOGSQ13724 837 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 CCL15Q16663 113 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 SKOR2Q2VWA4 1001 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 GPAT2Q6NUI2 795 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 JMYQ8N9B5 988 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 KCNG4Q8TDN1 519 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 P2RX7Q99572 595 aaKnown RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 NAP1L4Q99733 375 aaKnown RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 BIN2Q9UBW5 565 aaPredicted RBP15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 TLL2Q9Y6L7 1015 aa15.15■□□□□ 0.02
VTI1BP1-201ENST00000486325 GOLGA6L4A6NEF3 574 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 MANSC4A6NHS7 340 aaPredicted RBP15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 FIBPO43427 364 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 STAT3P40763 770 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 SLC39A14Q15043 492 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 STK38Q15208 465 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 LEO1Q8WVC0 666 aaPredicted RBP15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
VTI1BP1-201ENST00000486325 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 MEIS2O14770 477 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 ALAS1P13196 640 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 COPB2P35606 906 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 TOB1P50616 345 aaPredicted RBP15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 HERVK_113P62684 666 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 LINC00301Q8NCQ3 95 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 RASGRP4Q8TDF6 673 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 TRERF1Q96PN7 1200 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 RABGAP1Q9Y3P9 1069 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 CLIC4Q9Y696 253 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 MORC2Q9Y6X9 1032 aaPredicted RBP15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 PTPRFP10586 1907 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 TCHHQ07283 1943 aa15.13■□□□□ 0.01
VTI1BP1-201ENST00000486325 SPTLC2O15270 562 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 PPP6R2O75170 966 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 CFBP00751 764 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 ATP2B1P20020 1258 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 USP11P51784 963 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 UBE2HP62256 183 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 GHRHRQ02643 423 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 TMEM132BQ14DG7 1078 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 INF2Q27J81 1249 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 TTC38Q5R3I4 469 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 SNRNP48Q6IEG0 339 aaKnown RBP15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
VTI1BP1-201ENST00000486325 RASAL3Q86YV0 1011 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms