RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 LOC102724159A0A0B4J2E5 919 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 PWP2Q15269 919 aaKnown RBP15.45■□□□□ 0.06
HDAC6-227ENST00000485102 RAB30Q15771 203 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 TSHZ3Q63HK5 1081 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 PI4K2BQ8TCG2 481 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 TRERF1Q96PN7 1200 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 NAPBQ9H115 298 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 MTIF3Q9H2K0 278 aaKnown RBP15.45■□□□□ 0.06
HDAC6-227ENST00000485102 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
HDAC6-227ENST00000485102 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-227ENST00000485102 ZEB2O60315 1214 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 MCCP23508 829 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 PBX2P40425 430 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 BEX3Q00994 111 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 ITGA7Q13683 1181 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
HDAC6-227ENST00000485102 TAPT1Q6NXT6 567 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 TLK2Q86UE8 772 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 ATXN2LQ8WWM7 1075 aaKnown RBP15.44■□□□□ 0.06
HDAC6-227ENST00000485102 SEC62Q99442 399 aaKnown RBP15.44■□□□□ 0.06
HDAC6-227ENST00000485102 GAS2L1Q99501 681 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-227ENST00000485102 IL17RBQ9NRM6 502 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 CYP39A1Q9NYL5 469 aa15.44■□□□□ 0.06
HDAC6-227ENST00000485102 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 FGBP02675 491 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 FGRP09769 529 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 ACRP10323 421 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 SMPD1P17405 629 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 CYP2C18P33260 490 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 AP5M1Q9H0R1 490 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 HIPK3Q9H422 1215 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 VTA1Q9NP79 307 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 ANAPC4Q9UJX5 808 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 CHD9Q3L8U1 2897 aa15.43■□□□□ 0.06
HDAC6-227ENST00000485102 FOXP2O15409 715 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 DYNC1LI2O43237 492 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-227ENST00000485102 ALAS1P13196 640 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 BTNL9Q6UXG8 535 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
HDAC6-227ENST00000485102 TICAM2Q86XR7 235 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 NOC4LQ9BVI4 516 aaKnown RBP15.42■□□□□ 0.06
HDAC6-227ENST00000485102 MSRAQ9UJ68 235 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 STX8Q9UNK0 236 aa15.42■□□□□ 0.06
HDAC6-227ENST00000485102 ORC4O43929 436 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 ICAM1P05362 532 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 IKQ13123 557 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-227ENST00000485102 ALX1Q15699 326 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 KCTD1Q719H9 257 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
HDAC6-227ENST00000485102 DCAF4Q8WV16 495 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 RANBP17Q9H2T7 1088 aaKnown RBP15.41■□□□□ 0.06
HDAC6-227ENST00000485102 PDGFCQ9NRA1 345 aa15.41■□□□□ 0.06
HDAC6-227ENST00000485102 CXXC1Q9P0U4 656 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-227ENST00000485102 ADD3Q9UEY8 706 aaKnown RBP15.41■□□□□ 0.06
HDAC6-227ENST00000485102 CHD7Q9P2D1 2997 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 RBM47A0AV96 593 aaKnown RBP15.4■□□□□ 0.06
HDAC6-227ENST00000485102 TSPY2A6NKD2 308 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 TNFRSF10AO00220 468 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 MUM1L1Q5H9M0 696 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 VWCEQ96DN2 955 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
HDAC6-227ENST00000485102 LCTP09848 1927 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 B4GALT4O60513 344 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 PFKMP08237 780 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 TRPV6Q9H1D0 765 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 WNT8AQ9H1J5 351 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 ALDH8A1Q9H2A2 487 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-227ENST00000485102 SLC28A3Q9HAS3 691 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 TCP11L1Q9NUJ3 509 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
HDAC6-227ENST00000485102 UMODL1Q5DID0 1318 aa15.39■□□□□ 0.05
HDAC6-227ENST00000485102 NMT2O60551 498 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 MX1P20591 662 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 OTOP2Q7RTS6 562 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 FBXO16Q8IX29 292 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-227ENST00000485102 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-227ENST00000485102 ASB2Q96Q27 587 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 INCENPQ9NQS7 918 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 THEGQ9P2T0 379 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 SCN10AQ9Y5Y9 1956 aa15.38■□□□□ 0.05
HDAC6-227ENST00000485102 RANBP6O60518 1105 aaKnown RBP15.37■□□□□ 0.05
HDAC6-227ENST00000485102 TOP1P11387 765 aaKnown RBP15.37■□□□□ 0.05
HDAC6-227ENST00000485102 POU3F3P20264 500 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms