RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
LIMS2-215ENST00000484252 C7orf25Q9BPX7 421 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 GBP3Q9H0R5 595 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-215ENST00000484252 MYO6Q9UM54 1294 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 POLR3GO15318 223 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-215ENST00000484252 CCNE1P24864 410 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 NAPAP54920 295 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 KRT83P78385 493 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 AMPD3Q01432 767 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 AMPD2Q01433 879 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 P2RX5Q93086 422 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
LIMS2-215ENST00000484252 REXO2Q9Y3B8 237 aaKnown RBP22.06■■□□□ 1.12
LIMS2-215ENST00000484252 PSMD14O00487 310 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 PLCG1P19174 1290 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 GPS2Q13227 327 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 MEA1Q16626 185 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 COBLL1Q53SF7 1204 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 HDXQ7Z353 690 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 CCDC24Q8N4L8 307 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 CSGALNACT2Q8N6G5 542 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 IPO4Q8TEX9 1081 aaKnown RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 ABL1P00519 1130 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 IRX5P78411 483 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 DIXDC1Q155Q3 683 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 BEND6Q5SZJ8 279 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 EHBP1Q8NDI1 1231 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 NEDD1Q8NHV4 660 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 RRP36Q96EU6 259 aaKnown RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 DUSP9Q99956 384 aaKnown RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 TUBGCP2Q9BSJ2 902 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 RTFDC1Q9BY42 306 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-215ENST00000484252 TRIM9Q9C026 710 aa22.05■■□□□ 1.12
LIMS2-215ENST00000484252 PES1O00541 588 aaKnown RBP22.04■■□□□ 1.12
LIMS2-215ENST00000484252 C16orf86Q6ZW13 317 aa22.04■■□□□ 1.12
LIMS2-215ENST00000484252 NEK8Q86SG6 692 aa22.04■■□□□ 1.12
LIMS2-215ENST00000484252 SLC44A5Q8NCS7 719 aa22.04■■□□□ 1.12
LIMS2-215ENST00000484252 IQCDQ96DY2 449 aa22.04■■□□□ 1.12
LIMS2-215ENST00000484252 ZNHIT6Q9NWK9 470 aaKnown RBP22.04■■□□□ 1.12
LIMS2-215ENST00000484252 TNRC6CQ9HCJ0 1690 aaKnown RBP22.04■■□□□ 1.12
LIMS2-215ENST00000484252 PLCG2P16885 1265 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 CYLC1P35663 651 aaPredicted RBP22.03■■□□□ 1.12
LIMS2-215ENST00000484252 PDE4DQ08499 809 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 TXNRD1Q16881 649 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 MAPKAPK5Q8IW41 473 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 EYA3Q99504 573 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 PLIN2Q99541 437 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 SEC63Q9UGP8 760 aaKnown RBP22.03■■□□□ 1.12
LIMS2-215ENST00000484252 SMCO2A6NFE2 343 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 CCNT1O60563 726 aaKnown RBP22.03■■□□□ 1.12
LIMS2-215ENST00000484252 LETM2Q2VYF4 491 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 CCDC170Q8IYT3 715 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 ARHGEF1Q92888 912 aaKnown RBP22.03■■□□□ 1.12
LIMS2-215ENST00000484252 PNKPQ96T60 521 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 TTYH3Q9C0H2 523 aa22.03■■□□□ 1.12
LIMS2-215ENST00000484252 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 ESYT2A0FGR8 921 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 B4DLN1 442 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 EIF3JO75822 258 aaKnown RBP22.02■■□□□ 1.12
LIMS2-215ENST00000484252 CDK8P49336 464 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 WDR59Q6PJI9 974 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 TRAPPC11Q7Z392 1133 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 LRRC15Q8TF66 581 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 SAP30BPQ9UHR5 308 aaKnown RBP22.02■■□□□ 1.12
LIMS2-215ENST00000484252 GUCA1BQ9UMX6 200 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 MTMR7Q9Y216 660 aa22.02■■□□□ 1.12
LIMS2-215ENST00000484252 hCG_1984214I3L0E3 225 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 GOLGA8HP0CJ92 632 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 ASIC1P78348 528 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 ZBED6P86452 979 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 FIGNQ5HY92 759 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 CNNM4Q6P4Q7 775 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 TXLNBQ8N3L3 684 aa22.02■■□□□ 1.11
LIMS2-215ENST00000484252 ZNF713Q8N859 430 aaPredicted RBP22.02■■□□□ 1.11
LIMS2-215ENST00000484252 MYH1P12882 1939 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 GPR75-ASB3A0A0A6YYF3 556 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 HOXA7P31268 230 aaPredicted RBP22.01■■□□□ 1.11
LIMS2-215ENST00000484252 BTDP43251 543 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 HERVK_113P62684 666 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 TBC1D8BQ0IIM8 1120 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 GRIK5Q16478 980 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 CALML4Q96GE6 196 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
LIMS2-215ENST00000484252 L1RE1Q9UN81 338 aa22.01■■□□□ 1.11
LIMS2-215ENST00000484252 A0A1W2PQJ5 194 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 ERICH4A6NGS2 130 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 TULP2O00295 520 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 KRT86O43790 486 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 IPO7O95373 1038 aaKnown RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 TRIM21P19474 475 aaKnown RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 CDK17Q00537 523 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 CCDC122Q5T0U0 273 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 ANKRD40Q6AI12 368 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 ZSCAN29Q8IWY8 852 aaPredicted RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 CNOT6LQ96LI5 555 aaKnown RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 EIF3CLB5ME19 914 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms