RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 PI16Q6UXB8 463 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 CCDC12Q8WUD4 166 aaPredicted RBP11.4□□□□□ -0.58
APTX-226ENST00000483148 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 ABCB6Q9NP58 842 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
APTX-226ENST00000483148 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 A6NNZ2 444 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 SHOX2O60902 331 aaPredicted RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 DTNBO60941 627 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CETPP11597 493 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 MNAT1P51948 309 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 STK3Q13188 491 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 NMIQ13287 307 aaPredicted RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 TNFAIP1Q13829 316 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 E2F4Q16254 413 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CSADQ9Y600 493 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 SALL1Q9NSC2 1324 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 IRF6O14896 467 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 HMGB1P09429 215 aaKnown RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 CCL5P13501 91 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 PSMC4P43686 418 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CRKP46108 304 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 GJA8P48165 433 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CACNB3P54284 484 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 MAP9Q49MG5 647 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 MFSD14BQ5SR56 506 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 CNPY4Q8N129 248 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 WDR66Q8TBY9 1149 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 HAUS7Q99871 368 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 NAA15Q9BXJ9 866 aaKnown RBP11.39□□□□□ -0.59
APTX-226ENST00000483148 BOLA2Q9H3K6 86 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
APTX-226ENST00000483148 EBAG9O00559 213 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
APTX-226ENST00000483148 GNRH1P01148 92 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 GJB1P08034 283 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 CCDC175P0C221 793 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 OSBPP22059 807 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 ZAP70P43403 619 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 PRMT2P55345 433 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 SPATS2Q86XZ4 545 aaKnown RBP11.38□□□□□ -0.59
APTX-226ENST00000483148 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 FAM177A1Q8N128 213 aaPredicted RBP11.38□□□□□ -0.59
APTX-226ENST00000483148 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
APTX-226ENST00000483148 LRCH3Q96II8 777 aa11.38□□□□□ -0.59
APTX-226ENST00000483148 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
APTX-226ENST00000483148 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 KIF5CO60282 957 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 N4BP1O75113 896 aaKnown RBP11.37□□□□□ -0.59
APTX-226ENST00000483148 GRK4P32298 578 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 NDUFA8P51970 172 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 SNAPC2Q13487 334 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 SF3A1Q15459 793 aaKnown RBP11.37□□□□□ -0.59
APTX-226ENST00000483148 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 HSD3B7Q9H2F3 369 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 SUGT1Q9Y2Z0 365 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
APTX-226ENST00000483148 RFX7Q2KHR2 1363 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
APTX-226ENST00000483148 A0A087WWV3 80 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 RNF40O75150 1001 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 PRPF6O94906 941 aaKnown RBP11.36□□□□□ -0.59
APTX-226ENST00000483148 SCRN1Q12765 414 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 STK38Q15208 465 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 GBP6Q6ZN66 633 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 Q6ZUG5 572 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 LINC00301Q8NCQ3 95 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 PNKPQ96T60 521 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 POLR3EQ9NVU0 708 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 NEDD4P46934 1319 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
APTX-226ENST00000483148 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 ZNF202O95125 648 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
APTX-226ENST00000483148 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 CTAGE8P0CG41 777 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 CMA1P23946 247 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 PRDX5P30044 214 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 PPIL2Q13356 520 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 CTAGE4Q8IX94 777 aa11.36□□□□□ -0.59
APTX-226ENST00000483148 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
APTX-226ENST00000483148 GIMAP7Q8NHV1 300 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms