RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
VTI1A-205ENST00000483122 PLEKP08567 350 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ERCC3P19447 782 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 HPDP32754 393 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-205ENST00000483122 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-205ENST00000483122 QPCTQ16769 361 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 TTYH3Q9C0H2 523 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ATP2C2O75185 946 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 TACC1O75410 805 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 DEXIO95424 95 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 LIFRP42702 1097 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 NAA25Q14CX7 972 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ZNF174Q15697 407 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 RTN1Q16799 776 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 IFT81Q8WYA0 676 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
VTI1A-205ENST00000483122 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 B4DLN1 442 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 BACH1O14867 736 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-205ENST00000483122 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-205ENST00000483122 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 MAGEC3Q8TD91 643 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 EPB41L5Q9HCM4 733 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 ZNHIT6Q9NWK9 470 aaKnown RBP13.12□□□□□ -0.31
VTI1A-205ENST00000483122 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 H7C1D1 291 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
VTI1A-205ENST00000483122 ADD2P35612 726 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 INHBEP58166 350 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 CD302Q8IX05 232 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 GDF3Q9NR23 364 aa13.12□□□□□ -0.31
VTI1A-205ENST00000483122 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 KIF3CO14782 793 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 GTPBP6O43824 516 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 PRLRP16471 622 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 SCTRP47872 440 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 BIRC2Q13490 618 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 BYSLQ13895 437 aaKnown RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 TRADDQ15628 312 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 CIAO1O76071 339 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 SRGNP10124 158 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 GBP2P32456 591 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 RASSF8Q8NHQ8 419 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
VTI1A-205ENST00000483122 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 HMGB1P1B2RPK0 211 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PRDM1O75626 825 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 EVA1CP58658 441 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-205ENST00000483122 GRIK3Q13003 919 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 TMOD1P28289 359 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 MCAMP43121 646 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 DNM2P50570 870 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 ZBED6P86452 979 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PAK2Q13177 524 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 SPA17Q15506 151 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 GLE1Q53GS7 698 aaKnown RBP13.1□□□□□ -0.31
VTI1A-205ENST00000483122 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms