RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TUBB4AP04350 444 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 ANO1Q5XXA6 986 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 HS2ST1Q7LGA3 356 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 EXOC8Q8IYI6 725 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 GIMAP8Q8ND71 665 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 SOCS4Q8WXH5 440 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 FAM212AQ96EL1 285 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 PDLIM2Q96JY6 352 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 TSPYL2Q9H2G4 693 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 RAVER2Q9HCJ3 691 aaKnown RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 RTEL1Q9NZ71 1219 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 ZMYM6O95789 1325 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 ZNF609O15014 1411 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 F5H6K3 240 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 PRKAB2O43741 272 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 PPATQ06203 517 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 KLRC3Q07444 240 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 RESTQ13127 1097 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 TKFCQ3LXA3 575 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 SPDYE2Q495Y8 402 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 DACT2Q5SW24 774 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 C7orf31Q8N865 590 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 SPC24Q8NBT2 197 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 NSUN6Q8TEA1 469 aaKnown RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 ATP6V0A1Q93050 837 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 NSUN4Q96CB9 384 aaKnown RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 SMCO2A6NFE2 343 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 PDHXO00330 501 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 PPM1FP49593 454 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 MYSM1Q5VVJ2 828 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 PLA2G4DQ86XP0 818 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 CNNM3Q8NE01 707 aa6.68□□□□□ -1.34
CPS1-207ENST00000479988 DCP1AQ9NPI6 582 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 RRAGDQ9NQL2 400 aaPredicted RBP6.68□□□□□ -1.34
CPS1-207ENST00000479988 CUTAO60888 179 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 ERLIN2O94905 339 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 HSPA6P17066 643 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 CRY2Q49AN0 593 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 TRERF1Q96PN7 1200 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 SUGCTQ9HAC7 445 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 COL16A1Q07092 1604 aaPredicted RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 CCDC169A6NNP5 214 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 SERPINC1P01008 464 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 SLC16A2P36021 539 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 KIAA1841Q6NSI8 718 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 ZNF784Q8NCA9 323 aaPredicted RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 RPS6KC1Q96S38 1066 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 STRCQ7RTU9 1775 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 M0R2C6 588 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 RNASELQ05823 741 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 NCAPH2Q6IBW4 605 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 DGKHQ86XP1 1220 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 TEKT3Q9BXF9 490 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 GTPBP4Q9BZE4 634 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 NCOA5Q9HCD5 579 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 FLT1P17948 1338 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 LTBP3Q9NS15 1303 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 GPR75-ASB3A0A0A6YYF3 556 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 TRAF5O00463 557 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 HARSP12081 509 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 KRT13P13646 458 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 IL1R1P14778 569 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 EIF2AK2P19525 551 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 RDXP35241 583 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 CDC37Q16543 378 aaPredicted RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 FAM173BQ6P4H8 233 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 STAG1Q8WVM7 1258 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 STRBPQ96SI9 672 aaKnown RBP6.67□□□□□ -1.34
CPS1-207ENST00000479988 FAM184BQ9ULE4 1060 aa6.67□□□□□ -1.34
CPS1-207ENST00000479988 ZNF541Q9H0D2 1346 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 hCG_1984214I3L0E3 225 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 SORBS3O60504 671 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 INPP5BP32019 993 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 PPIL2Q13356 520 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 TFDP1Q14186 410 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 TCERG1LQ5VWI1 586 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 ZNF713Q8N859 430 aaPredicted RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 RMDN3Q96TC7 470 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 KATNAL1Q9BW62 490 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 AGXT2Q9BYV1 514 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MROH8Q9H579 483 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 ABCB11O95342 1321 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MSCO60682 206 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 CMA1P23946 247 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 CCT6AP40227 531 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 STAT6P42226 847 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 C1QTNF8P60827 252 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms