RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 OXER1Q8TDS5 423 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 CCDC102AQ96A19 550 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 ZNF396Q96N95 335 aaPredicted RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 ASCC2Q9H1I8 757 aaPredicted RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 CCPG1Q9ULG6 757 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
RPP40-205ENST00000479782 KRT85P78386 507 aa16.25■□□□□ 0.19
RPP40-205ENST00000479782 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
RPP40-205ENST00000479782 REXO1Q8N1G1 1221 aaKnown RBP16.25■□□□□ 0.19
RPP40-205ENST00000479782 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
RPP40-205ENST00000479782 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
RPP40-205ENST00000479782 TESPA1A2RU30 521 aaPredicted RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 CLK2P49760 499 aaKnown RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 HERVK_113P62684 666 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 TKFCQ3LXA3 575 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 RILPL1Q5EBL4 403 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 CPXCR1Q8N123 301 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 SAMD3Q8N6K7 520 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 P2RX7Q99572 595 aaKnown RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 TEX13BQ9BXU2 312 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 MAF1Q9H063 256 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 RAVER2Q9HCJ3 691 aaKnown RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
RPP40-205ENST00000479782 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
RPP40-205ENST00000479782 CCDC194A0A1B0GVG4 234 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 INHBEP58166 350 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 DNM1Q05193 864 aaKnown RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 FAM173BQ6P4H8 233 aa16.23■□□□□ 0.19
RPP40-205ENST00000479782 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
RPP40-205ENST00000479782 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
RPP40-205ENST00000479782 PDHXO00330 501 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 OPLAHO14841 1288 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 ALAS1P13196 640 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 AP3B2Q13367 1082 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 TMEM132BQ14DG7 1078 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 NONOQ15233 471 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPP40-205ENST00000479782 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 SNRNP48Q6IEG0 339 aaKnown RBP16.22■□□□□ 0.19
RPP40-205ENST00000479782 PIK3AP1Q6ZUJ8 805 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
RPP40-205ENST00000479782 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 POLR3EQ9NVU0 708 aa16.22■□□□□ 0.19
RPP40-205ENST00000479782 BIN2Q9UBW5 565 aaPredicted RBP16.22■□□□□ 0.19
RPP40-205ENST00000479782 MEIS2O14770 477 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 ADAMTS3O15072 1205 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
RPP40-205ENST00000479782 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
RPP40-205ENST00000479782 COPB2P35606 906 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 STAT3P40763 770 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 APLP1P51693 650 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 GHRHRQ02643 423 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 RASGRP4Q8TDF6 673 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
RPP40-205ENST00000479782 GCOM1H8Y6P7 765 aaPredicted RBP16.2■□□□□ 0.18
RPP40-205ENST00000479782 POLR2MP0CAP2 368 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 PLS1Q14651 629 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 UBE2SQ16763 222 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 EARS2Q5JPH6 523 aaKnown RBP16.2■□□□□ 0.18
RPP40-205ENST00000479782 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 USP17L6PQ6QN14 398 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 RIOX2Q8IUF8 465 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 SMCR8Q8TEV9 937 aaPredicted RBP16.2■□□□□ 0.18
RPP40-205ENST00000479782 CLEC4DQ8WXI8 215 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 PARK7Q99497 189 aaKnown RBP16.2■□□□□ 0.18
RPP40-205ENST00000479782 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 CNPY2Q9Y2B0 182 aa16.2■□□□□ 0.18
RPP40-205ENST00000479782 RASSF10A6NK89 507 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 SPDYE3A6NKU9 549 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 SLC25A27O95847 323 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 CFBP00751 764 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
RPP40-205ENST00000479782 PTMSP20962 102 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 MCM4P33991 863 aa16.19■□□□□ 0.18
RPP40-205ENST00000479782 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
RPP40-205ENST00000479782 NASPP49321 788 aaPredicted RBP16.19■□□□□ 0.18
RPP40-205ENST00000479782 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms